Parental gene:

HMGA1, ENSAMEG00000001061

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192386.1:2321570..2325673(-)


>ENSAMEG00000001061
TCGAGCTCGAAGTCCAGCCAGCCCTTGGCCTCCAAGCAGGAAAAGGACGGCACTGAAAAGCGGGGGCGGGGCAGGCCGCG
CAAGCAGCCTCCGGTGAGTCCCGGGACGGCGCTGGTAGGGAGTCAGAAGGAACCCAGCGAAGTGCCAACACCTAAGAGAC
CTCGGGGCCGACCAAAGGGGAGCAAAAACAAGGGTGCTGCCAAGACCCGGAAAACTACCACAACTCCAGGGAGGAAACCA
AGGGGCAGACCCAAAAAACTGGAGAAGGAGGAAGAAGAGGGCATCTCGCAGGAGTCCTCCGAGGAGGAGCAG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015226 possible_ortholog 2 retrogenes
retro_cjac_1197, retro_cjac_3158,
Homo sapiens ENSG00000137309 ortholog_one2one 4 retrogenes
retro_hsap_1175, retro_hsap_2277, retro_hsap_4663, retro_hsap_695,
Myotis lucifugus ENSMLUG00000010085 ortholog_one2one 2 retrogenes
retro_mluc_1619, retro_mluc_2429,
Macaca mulatta ENSMMUG00000019529 possible_ortholog 2 retrogenes
retro_mmul_1276, retro_mmul_2406,
Mus musculus ENSMUSG00000046711 ortholog_one2many 1 retrogene
retro_mmus_188,
Nomascus leucogenys ENSNLEG00000008303 possible_ortholog 1 retrogene
retro_nleu_1097,
Pongo abelii ENSPPYG00000029838 possible_ortholog 4 retrogenes
retro_pabe_1941, retro_pabe_2441, retro_pabe_3623, retro_pabe_960,
Pan troglodytes ENSPTRG00000040884 ortholog_one2one 6 retrogenes
retro_ptro_1611, retro_ptro_2053, retro_ptro_3098, retro_ptro_499, retro_ptro_789, retro_ptro_807,
Rattus norvegicus ENSRNOG00000000488 ortholog_one2many 1 retrogene
retro_rnor_164,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_1637 62.79 81.73
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Download FASTA sequences of all ENSAMEG00000001061 retrocopies