Parental gene: | ENSPPYG00000019659 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 9:125654080..125667816(+) |
>ENSPPYG00000019659
ATGGCCCCTAAACGCCAGTCTCCACTCCCGCCTCAAAAGAAGAAACCAAGACCACCTCCTGCTCTGGGACCGGAGGAGAC
ATTGGCCTCTGCAGGCTTGCCGAAGAAGGGAGAAAAAGAACAGCAAGAAGCGATTGAACACATTGATGAAGTACAAAATG
AAATAGACAGACTTAATGAACAAGCCAGTGAGGAGATTTTGAAAGTAGAACAGAAATATAACAAACTCCGCCAACCATTT
TTTCAGAAGAGGTCAGAATTGATCGCCAAAATCCCAAATTTTTGGGTAACAACATTTGTCAACCATCCACAAGTGTCTGC
ACTGCTTGGGGAGGAAGACGAAGAGGCACTGCATTATTTGACCAGAGTTGAAGTGACAGAATTTGAAGATATTAAATCAG
GTTACAGAATAGATTTTTATTTTGATGAAAATCCTTACTTTGAAAATAAAGTTCTCTCCAAAGAATTTCATCTGAACGAG
AGTGGTGATCCATCTTCAAAGTCCACCGAAATCAAATGGAAATCTGGAAAGGATTTGACAAAACGTTCAAGTCAAACGCA
GAATAAAGCCAGCAGGAAGAGGCAGCATGAGGAACCAGAGAGCTTCTTTACCTGGTTTACTGACCATTCTGATGCAGGTG
CTGATGAGTTAGGAGAGGTCATCAAAGATGATATTTGGCCAAACCCATTACAGTACTACTTGGTTCCCGATATGGATGAT
GAAGAAGGAGAAGGAGAAGAAGATGATGATGATGATGAAGAGGAGGAAGGATTAGAAGATATTGATGAAGAAGGGGATGA
GGATGAAGGTGAAGAAGATGAAGATGATGATGAAGGGGAGGAAGGAGAGGAGGATGAAGGAGAAGATGACTAA
ATGGCCCCTAAACGCCAGTCTCCACTCCCGCCTCAAAAGAAGAAACCAAGACCACCTCCTGCTCTGGGACCGGAGGAGAC
ATTGGCCTCTGCAGGCTTGCCGAAGAAGGGAGAAAAAGAACAGCAAGAAGCGATTGAACACATTGATGAAGTACAAAATG
AAATAGACAGACTTAATGAACAAGCCAGTGAGGAGATTTTGAAAGTAGAACAGAAATATAACAAACTCCGCCAACCATTT
TTTCAGAAGAGGTCAGAATTGATCGCCAAAATCCCAAATTTTTGGGTAACAACATTTGTCAACCATCCACAAGTGTCTGC
ACTGCTTGGGGAGGAAGACGAAGAGGCACTGCATTATTTGACCAGAGTTGAAGTGACAGAATTTGAAGATATTAAATCAG
GTTACAGAATAGATTTTTATTTTGATGAAAATCCTTACTTTGAAAATAAAGTTCTCTCCAAAGAATTTCATCTGAACGAG
AGTGGTGATCCATCTTCAAAGTCCACCGAAATCAAATGGAAATCTGGAAAGGATTTGACAAAACGTTCAAGTCAAACGCA
GAATAAAGCCAGCAGGAAGAGGCAGCATGAGGAACCAGAGAGCTTCTTTACCTGGTTTACTGACCATTCTGATGCAGGTG
CTGATGAGTTAGGAGAGGTCATCAAAGATGATATTTGGCCAAACCCATTACAGTACTACTTGGTTCCCGATATGGATGAT
GAAGAAGGAGAAGGAGAAGAAGATGATGATGATGATGAAGAGGAGGAAGGATTAGAAGATATTGATGAAGAAGGGGATGA
GGATGAAGGTGAAGAAGATGAAGATGATGATGAAGGGGAGGAAGGAGAGGAGGATGAAGGAGAAGATGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 83 .16 RPM |
| SRP007412_cerebellum | 86 .34 RPM |
| SRP007412_heart | 51 .00 RPM |
| SRP007412_kidney | 84 .13 RPM |
| SRP007412_liver | 59 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015686 | possible_ortholog | 7 retrogenes | |
| Bos taurus | ENSBTAG00000020959 | possible_ortholog | 8 retrogenes | |
| Canis familiaris | ENSCAFG00000032728 | possible_ortholog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000002802 | possible_ortholog | 3 retrogenes | |
| Equus caballus | ENSECAG00000009117 | possible_ortholog | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000006238 | possible_ortholog | 11 retrogenes | |
| Echinops telfairi | ENSETEG00000016746 | ortholog_one2one | 15 retrogenes | |
| Felis catus | ENSFCAG00000005848 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000119335 | possible_ortholog | 14 retrogenes | |
| Microcebus murinus | ENSMICG00000017643 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000014291 | ortholog_one2one | 13 retrogenes | |
| Macaca mulatta | ENSMMUG00000008532 | possible_ortholog | 11 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013069 | ortholog_one2one | 10 retrogenes | |
| Mus musculus | ENSMUSG00000054766 | ortholog_one2many | 17 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017595 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000007501 | possible_ortholog | 12 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007635 | possible_ortholog | 13 retrogenes | |
| Pan troglodytes | ENSPTRG00000021436 | possible_ortholog | 16 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000003437 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000010546 | possible_ortholog | 6 retrogenes | |
| Tursiops truncatus | ENSTTRG00000011605 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_299 | 91.98 | 81.03 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_400 | 79.41 | 81.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_414 | 75.81 | 63.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_470 | 95.38 | 67.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_720 | 72.57 | 74.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_838 | 96.19 | 81.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_1076 | 94.85 | 80.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_1110 | 82.92 | 82.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pabe_1150 | 69.30 | 78.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_pabe_1218 | 71.97 | 53.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_pabe_1452 | 92.69 | 75.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_pabe_1717 | 76.05 | 81.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_pabe_1771 | 92.83 | 81.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_pabe_2549 | 85.20 | 85.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_pabe_2557 | 54.01 | 63.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_pabe_2740 | 84.39 | 58.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_pabe_3667 | 87.76 | 81.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000019659 retrocopies