Parental gene:

SET, ENSDNOG00000002802

Aliases:None
Description:SET nuclear oncogene [Source:HGNC Symbol;Acc:10760]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2292:36694..48705(+)


>ENSDNOG00000002802
ATGGTCCCCAAACGCCAGTCTTCACTCCTGCCTCACTCGAAGAGAGCAAAACTGCTTCCCATCCCACCAGAGGAGACACC
GGCCGCTCTGGACTTGCCAAAAGGAGAAAAAGAACAGCAGGAAGCAATTGAACATATTGATGAAGTACAAAATGAAATAG
ACAGACTTAATGAACAAGCCAGTGAGGAGATTTTGAAAGTAGAACAGAAATATAATAAACTCCGCCAACCATTCTTTCAG
AAGAGGTCAGAATTGATCGCCAAAATCCCAAATTTTTGGGTAACAACATTTGTCAACCATCCACAAGTGTCTGCACTGCT
TGGGGAGGAAGATGAAGAGGCGCTGCATTATTTGACCAGAGTTGAAGTGACAGAATTTGAAGATATTAAATCAGGTTACA
GAATAGATTTTTATTTTGATGAAAATCCTTACTTCGAAAATAAAGTTCTCTCCAAAGAATTTCATCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATG
AGTTAAGAGAGGTCATCAAAGATGATATATGGCCAAATCCATCTATGCACTATTTGGTTCCTGATATGAATGATGAAGGG
GAAGGAGAAGAAGCTGATGATGATGATGATGAAGAAGAAGAAAGACTGGAAGATATTGATGAAGAAGGGGATGAGGATGA
AGGGGAATCTGAAGATGATGATGAGGGAGAGGAAGGCAAGGAGGATGAAGGAGAAGATGACTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 34 .62 RPM
SRP012922_cerebellum 23 .92 RPM
SRP012922_heart 12 .07 RPM
SRP012922_kidney 24 .64 RPM
SRP012922_liver 14 .86 RPM
SRP012922_lung 31 .16 RPM
SRP012922_quadricep_muscle 14 .37 RPM
SRP012922_spleen 54 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015686 possible_ortholog 7 retrogenes
retro_amel_1093, retro_amel_1201, retro_amel_1459, retro_amel_1675, retro_amel_530, retro_amel_631, retro_amel_634,
Bos taurus ENSBTAG00000020959 possible_ortholog 8 retrogenes
retro_btau_1179, retro_btau_1490, retro_btau_1519, retro_btau_1556, retro_btau_464, retro_btau_469, retro_btau_749, retro_btau_955,
Canis familiaris ENSCAFG00000032728 possible_ortholog 2 retrogenes
retro_cfam_47, retro_cfam_83,
Felis catus ENSFCAG00000005848 possible_ortholog 2 retrogenes
retro_fcat_130, retro_fcat_89,
Myotis lucifugus ENSMLUG00000014291 possible_ortholog 13 retrogenes
retro_mluc_1026, retro_mluc_1120, retro_mluc_1673, retro_mluc_1977, retro_mluc_2098, retro_mluc_2188, retro_mluc_2361, retro_mluc_2412, retro_mluc_2584, retro_mluc_419, retro_mluc_524, retro_mluc_855, retro_mluc_881,
Macaca mulatta ENSMMUG00000008532 possible_ortholog 11 retrogenes
retro_mmul_1133, retro_mmul_1261, retro_mmul_1534, retro_mmul_2096, retro_mmul_2175, retro_mmul_2241, retro_mmul_2262, retro_mmul_2614, retro_mmul_362, retro_mmul_419, retro_mmul_569,
Mustela putorius furo ENSMPUG00000013069 possible_ortholog 10 retrogenes
retro_mputfur_1330, retro_mputfur_1556, retro_mputfur_1581, retro_mputfur_1605, retro_mputfur_221, retro_mputfur_274, retro_mputfur_286, retro_mputfur_723, retro_mputfur_785, retro_mputfur_799,
Nomascus leucogenys ENSNLEG00000017595 ortholog_one2one 2 retrogenes
retro_nleu_108, retro_nleu_870,
Oryctolagus cuniculus ENSOCUG00000007501 possible_ortholog 12 retrogenes
retro_ocun_1107, retro_ocun_1110, retro_ocun_1234, retro_ocun_1311, retro_ocun_1563, retro_ocun_276, retro_ocun_407, retro_ocun_421, retro_ocun_423, retro_ocun_476, retro_ocun_859, retro_ocun_923,
Otolemur garnettii ENSOGAG00000007635 possible_ortholog 13 retrogenes
retro_ogar_115, retro_ogar_1370, retro_ogar_3084, retro_ogar_3186, retro_ogar_3195, retro_ogar_3289, retro_ogar_447, retro_ogar_465, retro_ogar_543, retro_ogar_565, retro_ogar_806, retro_ogar_899, retro_ogar_934,
Pongo abelii ENSPPYG00000019659 possible_ortholog 17 retrogenes
retro_pabe_1076, retro_pabe_1110, retro_pabe_1150, retro_pabe_1218, retro_pabe_1452, retro_pabe_1717, retro_pabe_1771, retro_pabe_2549, retro_pabe_2557, retro_pabe_2740, retro_pabe_299, retro_pabe_3667, retro_pabe_400, retro_pabe_414, retro_pabe_470, retro_pabe_720, retro_pabe_838,
Ictidomys tridecemlineatus ENSSTOG00000010546 possible_ortholog 6 retrogenes
retro_itri_1204, retro_itri_1588, retro_itri_477, retro_itri_529, retro_itri_603, retro_itri_876,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_160 64.94 52.96
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_dnov_464 77.78 52.26
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_dnov_1830 84.38 54.01
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000002802 retrocopies