Parental gene:

DDA1, ENSPPYG00000009710

Aliases:None
Description:DET1- and DDB1-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5RD86]
Organism:Orangutan (Pongo abelii)
Coordinates:19:17685438..17697483(+)


>ENSPPYG00000009710
ATGGCAGATTTTTTGAAAGGACTGCCTGTCTACAACAAAAGCAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGC
CTCGAACCGACGGCCCTCAGTCTACCTGCCCACCCGAGAATACCCGTCTGAACAGATCATCGTGACAGAAAAGACAAACA
TCCTCCTGCGCTACCTGCATCAGCAATGGGACAAAAAGAACGCTGCCAAGAAGAGAGACCAGGAGCAAGTGGAGCTGGAA
GGCGAGAGCTCCGCACCTCCCCGCAAGGTGGCGCGGACCGACAGCCCAGACATGCACGAGGACACTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .15 RPM
SRP007412_cerebellum 5 .23 RPM
SRP007412_heart 5 .18 RPM
SRP007412_kidney 8 .88 RPM
SRP007412_liver 5 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017068 ortholog_one2many 3 retrogenes
retro_btau_1152, retro_btau_536, retro_btau_74,
Canis familiaris ENSCAFG00000031251 ortholog_one2one 3 retrogenes
retro_cfam_1089, retro_cfam_2033, retro_cfam_475,
Cavia porcellus ENSCPOG00000006944 ortholog_one2one 1 retrogene
retro_cpor_435,
Felis catus ENSFCAG00000001001 ortholog_one2one 1 retrogene
retro_fcat_487,
Homo sapiens ENSG00000130311 ortholog_one2one 1 retrogene
retro_hsap_1409,
Gorilla gorilla ENSGGOG00000005802 ortholog_one2one 1 retrogene
retro_ggor_1093,
Microcebus murinus ENSMICG00000001763 ortholog_one2one 1 retrogene
retro_mmur_1162,
Myotis lucifugus ENSMLUG00000003990 ortholog_one2one 1 retrogene
retro_mluc_1014,
Macaca mulatta ENSMMUG00000016231 ortholog_one2one 1 retrogene
retro_mmul_2248,
Nomascus leucogenys ENSNLEG00000005738 ortholog_one2one 2 retrogenes
retro_nleu_1427, retro_nleu_1428,
Otolemur garnettii ENSOGAG00000003701 ortholog_one2one 1 retrogene
retro_ogar_2375,
Pan troglodytes ENSPTRG00000010668 ortholog_one2one 1 retrogene
retro_ptro_966,
Rattus norvegicus ENSRNOG00000039417 ortholog_one2one 1 retrogene
retro_rnor_1511,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1167 89.32 100.00
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2. retro_pabe_1214 89.32 100.00
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Download FASTA sequences of all ENSPPYG00000009710 retrocopies