Parental gene:

NUDT5, ENSOCUG00000009308

Aliases:None
Description:nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:HGNC Symbol;Acc:8052]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:16:16804431..16821508(-)


>ENSOCUG00000009308
ATGGAAAATCAAGAAGCAACAGATTCTACTCAGAATGTCAAACAGTGTATTATTTCAGAGGAGTTAATTTCAGAAGGAAA
ATGGGTCAAGCTTGAAAAAACAACTTACCTGGATCCTACTGGTAAAACTCGAACCTGGGAAACAGTGAAACGTACAACCA
AGAAGGCACAGTCCGCCGATGGTGTAGCGGTCATCCCGGTGCTGCAAAGAACTCTTCACTATGAGTGTATAGTTCTGGTG
AAACAGTTCCGGCCGCCAATGGGAGGCTACTGTCTCGAGTTCCCGGCAGGTCTCATAGACGACGGTGAAAGCCCAGAAGC
AGCTGCGCTCCGGGAGCTGGAGGAGGAGACGGGCTACAAAGGTGACATTGCTGAGTGCTCTCCAGCTGTATGTATGGATC
CAGGCTTGTCCAACTGCACCACCCACATAGTGACAGTAACCATTAATGGAGATGATGCCGAGAACGTCAGACCGAAGCCG
AAGCCAGGAGAAGGAGAATTTGTGGAAGTCATTTCTTTACCAAAGAACGACCTGCTCAAGAGACTTGATGCTCTGATAGC
CGAAGAACATCTCACAGTGGATGCCAGGGTCTACTCCTATGCTCTGGCACTGAAACACGCAAACACGAAGCCATTTGAAG
TGCCCTTCCTGAAATTTTAA

Library Parental gene expression (RPM)
SRP017611_liver 16 .73 RPM
SRP017611_kidney 16 .52 RPM
SRP017611_brain 13 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019509 ortholog_one2one 2 retrogenes
retro_btau_1326, retro_btau_1438,
Canis familiaris ENSCAFG00000004794 ortholog_one2one 2 retrogenes
retro_cfam_435, retro_cfam_612,
Equus caballus ENSECAG00000023658 ortholog_one2one 1 retrogene
retro_ecab_647,
Echinops telfairi ENSETEG00000006403 ortholog_one2many 1 retrogene
retro_etel_946,
Felis catus ENSFCAG00000025093 ortholog_one2one 1 retrogene
retro_fcat_350,
Homo sapiens ENSG00000165609 ortholog_one2one 1 retrogene
retro_hsap_3580,
Gorilla gorilla ENSGGOG00000006325 ortholog_one2one 1 retrogene
retro_ggor_2415,
Loxodonta africana ENSLAFG00000012052 ortholog_one2one 1 retrogene
retro_lafr_226,
Myotis lucifugus ENSMLUG00000010453 ortholog_one2one 2 retrogenes
retro_mluc_1263, retro_mluc_2073,
Macaca mulatta ENSMMUG00000017141 ortholog_one2one 1 retrogene
retro_mmul_1828,
Nomascus leucogenys ENSNLEG00000012298 ortholog_one2one 1 retrogene
retro_nleu_2838,
Otolemur garnettii ENSOGAG00000005816 ortholog_one2one 2 retrogenes
retro_ogar_2071, retro_ogar_2988,
Pongo abelii ENSPPYG00000002091 ortholog_one2one 2 retrogenes
retro_pabe_2949, retro_pabe_3040,
Pan troglodytes ENSPTRG00000002294 ortholog_one2one 1 retrogene
retro_ptro_2427,
Rattus norvegicus ENSRNOG00000017741 ortholog_one2many 1 retrogene
retro_rnor_1672,
Sus scrofa ENSSSCG00000011113 ortholog_one2many 1 retrogene
retro_sscr_143,
Tursiops truncatus ENSTTRG00000007394 ortholog_one2one 2 retrogenes
retro_ttru_209, retro_ttru_495,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_862 95.10 93.15
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Download FASTA sequences of all ENSOCUG00000009308 retrocopies