Parental gene:

ENSOCUG00000007220

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:X:111491396..111494991(-)


>ENSOCUG00000007220
ATGGTTGAAGCAGATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACAGAAACAAATGAGAAAGCCCTTGAAGCAGT
ATTTGGCAAATATGGACGAATAGTGGAGGTACTCTTGATGAAAGACCGTGAAACCAACAAATCAAGAGGTTTTGCTTTTG
TCACCTTTGAAAGCCCAGCAGATGCTAAGGATGCTGCCAGAGACATGAATGGAAAGTCCTTGGATGGGAAAGCCATCAAG
GTGGAACAGGCTACCAAGCCATCATTTGAAAGTGGTAGGCGTGGACCACCTCCACCTCCACGAAGCAGAGGCCCACCAAG
AGGTCTTCGGGGAGGAAGAGGAGGAAGTGGAGGAACTCGAGGACCTCCCTCACGTGGAGGGCACATGGATGATGGTGGCT
ATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCGCTTCCAGTAAAAAGAGGACCACCACCACGAAGTGGGGGTCCT
CCTCCTAAAAGATCAGCCCCTTCAGGACCAGTTCGCAGCAGCAGTGGAATGGGAGGAAGAGCCCCTGTATCACGTGGAAG
AGACAGTTACGGAGGCCCACCTCGGAGGGAGCCCCTGCCTTCTCGCAGAGATGTTTATTTGTCCCCAAGAGATGATGGAT
ACTCTACTAAAGACAGCTATTCAAGCAGAGATTACCCGAGTTCTCGTGATACAAGAGATTATGCACCACCACCAAGAGAC
TATACCTACCGTGATTATGGTCATTCCAGTTCACGTGATGACTATCCATCAAGAGGCTATAGTGATAGAGATGGATATGG
TCGTGATCGGGACTATTCAGATCATCCAAGTGGAGGTTCCTACCGAGATTCCTATGAGAGTTATGGTAACTCACGTAGTG
CTCCACCTACACGAGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATAT
GGTGGAAGTCGAGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGCGATCGGGTTGGCAGACAAGAAAG
AGGGCTTCCTCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAG
GTGGTGGCCGTGGAGGAAACCGATCTGATAGAGGGGGAGGCAGAAGCAGATACTAG

Library Parental gene expression (RPM)
SRP017611_liver 16 .34 RPM
SRP017611_kidney 35 .47 RPM
SRP017611_brain 38 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013308 possible_ortholog 1 retrogene
retro_btau_36,
Canis familiaris ENSCAFG00000018962 possible_ortholog 4 retrogenes
retro_cfam_1106, retro_cfam_1244, retro_cfam_1649, retro_cfam_1914,
Choloepus hoffmanni ENSCHOG00000012369 possible_ortholog 3 retrogenes
retro_chof_1240, retro_chof_2596, retro_chof_880,
Cavia porcellus ENSCPOG00000012164 possible_ortholog 1 retrogene
retro_cpor_778,
Dasypus novemcinctus ENSDNOG00000017199 possible_ortholog 3 retrogenes
retro_dnov_1436, retro_dnov_2205, retro_dnov_696,
Dipodomys ordii ENSDORG00000015481 possible_ortholog 1 retrogene
retro_dord_793,
Echinops telfairi ENSETEG00000013178 possible_ortholog 1 retrogene
retro_etel_1952,
Felis catus ENSFCAG00000004779 possible_ortholog 1 retrogene
retro_fcat_1903,
Homo sapiens ENSG00000147274 possible_ortholog 7 retrogenes
retro_hsap_23, retro_hsap_3074, retro_hsap_3587, retro_hsap_4144, retro_hsap_4846, retro_hsap_800, retro_hsap_91,
Gorilla gorilla ENSGGOG00000006944 possible_ortholog 1 retrogene
retro_ggor_657,
Loxodonta africana ENSLAFG00000005568 possible_ortholog 3 retrogenes
retro_lafr_1188, retro_lafr_276, retro_lafr_35,
Microcebus murinus ENSMICG00000006856 possible_ortholog 2 retrogenes
retro_mmur_1252, retro_mmur_661,
Myotis lucifugus ENSMLUG00000013209 ortholog_one2many 5 retrogenes
retro_mluc_1630, retro_mluc_1746, retro_mluc_203, retro_mluc_2180, retro_mluc_80,
Monodelphis domestica ENSMODG00000014054 possible_ortholog 1 retrogene
retro_mdom_1231,
Mustela putorius furo ENSMPUG00000001855 possible_ortholog 2 retrogenes
retro_mputfur_1539, retro_mputfur_956,
Mus musculus ENSMUSG00000031134 ortholog_one2one 2 retrogenes
retro_mmus_170, retro_mmus_187,
Otolemur garnettii ENSOGAG00000007839 possible_ortholog 5 retrogenes
retro_ogar_1057, retro_ogar_137, retro_ogar_1586, retro_ogar_2445, retro_ogar_2584,
Ochotona princeps ENSOPRG00000016593 possible_ortholog 1 retrogene
retro_opri_372,
Pongo abelii ENSPPYG00000020771 possible_ortholog 3 retrogenes
retro_pabe_2548, retro_pabe_303, retro_pabe_766,
Rattus norvegicus ENSRNOG00000000866 possible_ortholog 1 retrogene
retro_rnor_268,
Sorex araneus ENSSARG00000000397 possible_ortholog 1 retrogene
retro_sara_169,
Ictidomys tridecemlineatus ENSSTOG00000006211 possible_ortholog 2 retrogenes
retro_itri_1205, retro_itri_1346,
Tupaia belangeri ENSTBEG00000001154 ortholog_one2one 1 retrogene
retro_tbel_1919,
Tarsius syrichta ENSTSYG00000009555 possible_ortholog 1 retrogene
retro_tsyr_15,
Tursiops truncatus ENSTTRG00000007322 possible_ortholog 1 retrogene
retro_ttru_1450,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_3 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000007220 retrocopies