Parental gene:

Taf10, ENSMUSG00000043866

Aliases:None
Description:TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:MGI Symbol;Acc:MGI:1346320]
Organism:Mouse (Mus musculus)
Coordinates:7:105739392..105744361(-)


>ENSMUSG00000043866
ATGAGCTGCAGCGGCTCCGGCGCGGACCCCGAGGCGGCGACCGCCTGTGCCGCCTCGGTCGCGGGTCCGGCACCCCTGGT
GTCGGCTCCCGCTGCGCTGCCCACTAGCACGGCCGCGGAGAGCAAGGCCAGCCCCGCGGGGACAGCAGGGGGCCCCGTGG
CTGGAGTCGCCACTGCGGGCACGGGCCCCGTGGCGGCACGGGCAGGGGAGCCGGCAGAGCGGCGCGGGCCAGCTTCGGTG
GCAGCGGGCGGCGCGGCTCCCCCGGAGGGGGCAATGTCTAACGGGGTTTACGCCCTACCGAGCGCGGCCAACGGAGAAGT
GAAGCCCGTAGTGTCCAGCACACCTCTAGTGGACTTCTTGATGCAGTTGGAGGATTACACACCTACGATCCCAGATGCAG
TGACTGGTTACTACCTGAACCGCGCTGGCTTTGAAGCTTCAGACCCACGCATAATTCGGCTCATCTCACTAGCTGCCCAG
AAATTCATCTCAGATATTGCCAATGATGCCCTACAGCACTGCAAAATGAAGGGCACAGCCTCTGGCAGCTCCCGGAGCAA
GAGCAAGGATCGCAAGTACACCCTAACCATGGAGGACTTGACCCCTGCCCTCAGCGAGTATGGCATCAATGTGAAGAAGC
CGCACTACTTCACCTGA

Library Parental gene expression (RPM)
SRP007412_brain 21 .07 RPM
SRP007412_cerebellum 16 .72 RPM
SRP007412_heart 21 .11 RPM
SRP007412_kidney 28 .43 RPM
SRP007412_liver 25 .51 RPM
SRP007412_testis 48 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016278 ortholog_one2many 2 retrogenes
retro_amel_1088, retro_amel_297,
Canis familiaris ENSCAFG00000006498 ortholog_one2many 2 retrogenes
retro_cfam_1041, retro_cfam_992,
Dasypus novemcinctus ENSDNOG00000000814 ortholog_one2many 1 retrogene
retro_dnov_592,
Equus caballus ENSECAG00000007794 ortholog_one2many 1 retrogene
retro_ecab_525,
Erinaceus europaeus ENSEEUG00000008412 ortholog_one2many 3 retrogenes
retro_eeur_542, retro_eeur_692, retro_eeur_709,
Echinops telfairi ENSETEG00000008886 ortholog_one2many 1 retrogene
retro_etel_2090,
Felis catus ENSFCAG00000015390 ortholog_one2many 1 retrogene
retro_fcat_1458,
Loxodonta africana ENSLAFG00000029330 ortholog_one2many 1 retrogene
retro_lafr_750,
Macropus eugenii ENSMEUG00000008216 ortholog_one2many 2 retrogenes
retro_meug_1645, retro_meug_992,
Myotis lucifugus ENSMLUG00000024459 ortholog_many2many 1 retrogene
retro_mluc_1960,
Macaca mulatta ENSMMUG00000007743 ortholog_one2many 1 retrogene
retro_mmul_1144,
Tursiops truncatus ENSTTRG00000004894 ortholog_one2many 1 retrogene
retro_ttru_1113,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_35 95.41 100.00
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Download FASTA sequences of all ENSMUSG00000043866 retrocopies