Parental gene:

TAF10, ENSMMUG00000007743

Aliases:None
Description:transcription initiation factor TFIID subunit 10 [Source:RefSeq peptide;Acc:NP_001252715]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:14:65590825..65592228(+)


>ENSMMUG00000007743
ATGAGCTGCAGCGGCTCCGGCGCGGACCCCGAGGCGGCGCCGGCTTCCGCCGCCTCGGCCCCGGGCCCGGCACCCCCGGT
CTCGGCTCCCGCAGCGCTGCCCGCCAGCACCGCTGCGGAGAACAAGGCCAGCCCCGCGGGGACAGCAGGGGGGCCTGGGG
CTGGAGCAGCTGCTGGGGGCACGGGACCCTTGGCGGCGCGGGCCGGGGAGCCAGCTGAGCGGCGTGGGGCGGCTCCGGTG
TCGGCGGGTGGCGCGGCGCCCCCAGAAGGGGCCATGTCTAACGGGATTTACGTACTGCCGAGCGCGGCCAACGGAGACGT
GAAGCCGGTGGTGTCCAGCACGCCGTTGGTGGACTTCTTGATGCAGCTGGAGGATTACACGCCTACGATCCCAGATGCAG
TGACTGGTTACTACCTGAACCGTGCTGGCTTTGAGGCCTCAGACCCACGCATAATTCGGCTCATCTCCCTAGCTGCCCAG
AAATTCATCTCAGATATTGCCAATGATGCCCTACAGCACTGCAAAATGAAGGGCACAGCCTCCGGCAGCTCCCGGAGCAA
GAGCAAGGACCGCAAGTATACTTTAACCATGGAGGACTTGACCCCTGCCCTCAGCGAGTATGGCATCAATGTGAAGAAGC
CGCACTACTTCACCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .43 RPM
SRP007412_brain 10 .64 RPM
SRP007412_cerebellum 6 .78 RPM
SRP007412_heart 17 .37 RPM
SRP007412_kidney 25 .70 RPM
SRP007412_liver 39 .78 RPM
SRP007412_testis 92 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016278 ortholog_one2one 2 retrogenes
retro_amel_1088, retro_amel_297,
Canis familiaris ENSCAFG00000006498 ortholog_one2one 2 retrogenes
retro_cfam_1041, retro_cfam_992,
Dasypus novemcinctus ENSDNOG00000000814 ortholog_one2one 1 retrogene
retro_dnov_592,
Equus caballus ENSECAG00000007794 ortholog_one2one 1 retrogene
retro_ecab_525,
Erinaceus europaeus ENSEEUG00000008412 ortholog_one2one 3 retrogenes
retro_eeur_542, retro_eeur_692, retro_eeur_709,
Echinops telfairi ENSETEG00000008886 ortholog_one2one 1 retrogene
retro_etel_2090,
Felis catus ENSFCAG00000015390 ortholog_one2one 1 retrogene
retro_fcat_1458,
Loxodonta africana ENSLAFG00000029330 ortholog_one2one 1 retrogene
retro_lafr_750,
Macropus eugenii ENSMEUG00000008216 ortholog_one2one 2 retrogenes
retro_meug_1645, retro_meug_992,
Myotis lucifugus ENSMLUG00000024459 ortholog_one2many 1 retrogene
retro_mluc_1960,
Mus musculus ENSMUSG00000043866 ortholog_one2many 1 retrogene
retro_mmus_35,
Tursiops truncatus ENSTTRG00000004894 ortholog_one2one 1 retrogene
retro_ttru_1113,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1144 82.35 93.12
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Download FASTA sequences of all ENSMMUG00000007743 retrocopies