Parental gene:

TAF10, ENSFCAG00000015390

Aliases:None
Description:TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa [Source:HGNC Symbol;Acc:11543]
Organism:Cat (Felis catus)
Coordinates:D1:65603368..65604571(-)


>ENSFCAG00000015390
ATGAGCTGCAGCGGCTCCGGCGCGGACCCCGAGGCGGCGCCGGGCTCCGCCGCCTCGGCCCCGGGCCCGACGCCCGCGGT
CTCGGCCCCCGCAGCGCTGCCCGCCGGCACCGCTGCGGAGAACAAGGCCAGCCCTGCAGGGACGACAGGGGGACCTGGGG
CTGGTGAGGGCAGAGGGTTTGAGGCAGACCTAGCTGGGCTTGCTGGTTCTCCTCCAGCTCCGGTGTCGGCGGGCGGCGCG
GCGCCCCCGGAGGGGGCCATGTCTAACGGGGTTTACGTGCTGCCGAGCGCGGCCAACGGAGACGTGAAGCCGGTGGTGTC
CAGCACGCCTCTGGTGGACTTCCTGATGCAGCTGGAGGATTACACGCCTACGATCCCAGATGCAGTGACTGGTTACTACC
TGAACCGCGCTGGCTTTGAGGCCTCGGACCCACGCATAATTCGGCTCATCTCCCTAGCTGCCCAGAAATTCATCTCAGAT
ATTGCCAACGATGCCCTACAGCACTGCAAAATGAAGGGCACAGCTTCTGGCAGCTCCCGAAGCAAGAGCAAGGACCGCAA
GTACACTCTAACCATGGAGGACTTGACCCCTGCCCTCAGCGAGTATGGCATCAATGTGAAGAAGCCGCACTACTTCACCT
GA

Library Parental gene expression (RPM)
SRP017611_liver 13 .75 RPM
SRP017611_kidney 33 .39 RPM
SRP017611_brain 20 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000006498 ortholog_one2one 2 retrogenes
retro_cfam_1041, retro_cfam_992,
Dasypus novemcinctus ENSDNOG00000000814 ortholog_one2one 1 retrogene
retro_dnov_592,
Equus caballus ENSECAG00000007794 ortholog_one2one 1 retrogene
retro_ecab_525,
Erinaceus europaeus ENSEEUG00000008412 ortholog_one2one 3 retrogenes
retro_eeur_542, retro_eeur_692, retro_eeur_709,
Echinops telfairi ENSETEG00000008886 ortholog_one2one 1 retrogene
retro_etel_2090,
Macropus eugenii ENSMEUG00000008216 ortholog_one2one 2 retrogenes
retro_meug_1645, retro_meug_992,
Myotis lucifugus ENSMLUG00000024459 possible_ortholog 1 retrogene
retro_mluc_1960,
Macaca mulatta ENSMMUG00000007743 ortholog_one2one 1 retrogene
retro_mmul_1144,
Mus musculus ENSMUSG00000043866 ortholog_one2many 1 retrogene
retro_mmus_35,
Tursiops truncatus ENSTTRG00000004894 ortholog_one2one 1 retrogene
retro_ttru_1113,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1458 69.63 61.03
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Download FASTA sequences of all ENSFCAG00000015390 retrocopies