Parental gene: | Rbm3, ENSMUSG00000031167 |
| Aliases: | Rbm3, 2600016C11Rik |
| Description: | RNA binding motif protein 3 [Source:MGI Symbol;Acc:MGI:1099460] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | X:8138974..8145880(-) |
>ENSMUSG00000031167
ATGTCGTCTGAAGAAGGGAAACTCTTCGTAGGAGGGCTCAACTTCAACACCGATGAACAGGCACTTGAAGACCACTTCAG
CAGCTTTGGGCCTATCTCTGAGGTGGTTGTTGTCAAGGACCGGGAGACTCAAAGATCCCGGGGTTTTGGCTTCATCACCT
TCACAAACCCAGAGCATGCCTCAGATGCGATGAGAGCTATGAATGGAGAGTCCCTGGATGGGCGCCAAATCCGAGTTGAT
CATGCAGGAAAGTCTGCCAGGGGATCCAGAGGGGGTGCCTTTGGTGGGCGTGGTCGCAGTTACTCTAGAGGTGGTGGAGA
CCAGGGATATGGAAGTGGAAGATATGACAGTCGTCCTGGAGGATATGGATATGGGTATGGGCGGTCTAGAGACTACAGTG
GCAGAAGCCAGGGTGGCTATGACCGCTACTCAGGAGGAAATTACAGAGACAATTATGACAACTGA
ATGTCGTCTGAAGAAGGGAAACTCTTCGTAGGAGGGCTCAACTTCAACACCGATGAACAGGCACTTGAAGACCACTTCAG
CAGCTTTGGGCCTATCTCTGAGGTGGTTGTTGTCAAGGACCGGGAGACTCAAAGATCCCGGGGTTTTGGCTTCATCACCT
TCACAAACCCAGAGCATGCCTCAGATGCGATGAGAGCTATGAATGGAGAGTCCCTGGATGGGCGCCAAATCCGAGTTGAT
CATGCAGGAAAGTCTGCCAGGGGATCCAGAGGGGGTGCCTTTGGTGGGCGTGGTCGCAGTTACTCTAGAGGTGGTGGAGA
CCAGGGATATGGAAGTGGAAGATATGACAGTCGTCCTGGAGGATATGGATATGGGTATGGGCGGTCTAGAGACTACAGTG
GCAGAAGCCAGGGTGGCTATGACCGCTACTCAGGAGGAAATTACAGAGACAATTATGACAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 32 .10 RPM |
| SRP007412_cerebellum | 46 .16 RPM |
| SRP007412_heart | 27 .61 RPM |
| SRP007412_kidney | 33 .07 RPM |
| SRP007412_liver | 21 .33 RPM |
| SRP007412_testis | 8 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000013718 | ortholog_one2one | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000012653 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000025848 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000015485 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000000182 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000024257 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000102317 | ortholog_one2one | 1 retrogene | |
| Gadus morhua | ENSGMOG00000012137 | ortholog_many2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007003 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003996 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000022858 | within_species_paralog | 6 retrogenes | |
| Mus musculus | ENSMUSG00000031134 | within_species_paralog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000007841 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020314 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021864 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000015630 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000021591 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027493 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000008670 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000008587 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_501 | 99.35 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2044 | 93.46 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2963 | 98.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_3019 | 75.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000031167 retrocopies