Parental gene: | RBM3, ENSTSYG00000008670 |
| Aliases: | None |
| Description: | RNA binding motif (RNP1, RRM) protein 3 [Source:HGNC Symbol;Acc:9900] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_8276:681..3092(+) |
>ENSTSYG00000008670
ATGTCTTCTGAAGAAGGAAAGCTCTTTGTGGGAGGGCTCAACTTTAACACCGATGAGCAGGCACTGGAAGACCACTTCAG
CAGCTTTGGCCCTATTTCTGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGGACGGTCGCCAGATCCGTGTTGAC
CATGCAGGCAAGTCTGCCCGGGGAACCAGAGGGGGTGCTTTTGGGGCCCGTGGTCGTGGCTACTCTAGAGGTGGTGGGGA
CCAAGGCTATGGGAGTGGCAGATATGACAGCCGACCTGGAGGATATGGATATGGATATGGACGGTCCAGAGACTATGGTG
GCAGAAACCAGGGTGGTTATGACCGCTACTCAGGAGGAAATTACAGAGACAATTATGACAACTGA
ATGTCTTCTGAAGAAGGAAAGCTCTTTGTGGGAGGGCTCAACTTTAACACCGATGAGCAGGCACTGGAAGACCACTTCAG
CAGCTTTGGCCCTATTTCTGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGGACGGTCGCCAGATCCGTGTTGAC
CATGCAGGCAAGTCTGCCCGGGGAACCAGAGGGGGTGCTTTTGGGGCCCGTGGTCGTGGCTACTCTAGAGGTGGTGGGGA
CCAAGGCTATGGGAGTGGCAGATATGACAGCCGACCTGGAGGATATGGATATGGATATGGACGGTCCAGAGACTATGGTG
GCAGAAACCAGGGTGGTTATGACCGCTACTCAGGAGGAAATTACAGAGACAATTATGACAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000013718 | ortholog_one2one | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000012653 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000025848 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000015485 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000000182 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000024257 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000102317 | ortholog_one2one | 1 retrogene | |
| Gadus morhua | ENSGMOG00000012137 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007003 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003996 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000031167 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000007841 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020314 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021864 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000015630 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000021591 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027493 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000000388 | within_species_paralog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009555 | within_species_paralog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008587 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_197 | 67.06 | 53.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_679 | 83.33 | 53.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_1733 | 85.71 | 54.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tsyr_2002 | 74.42 | 54.55 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000008670 retrocopies