Parental gene: | ENSMODG00000027565 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 4:202367798..202372450(+) |
>ENSMODG00000027565
ATGTACCGTCATGCTCTTCCTCCTGGTTTTGTATTAAAAAAAGATAAGAAGAAAGAAGAAAAAGAAGATGAAATTTCATT
AGAAGATCTAATTGAAAGAGAGCGTTCTGCTTTAGGACCAAATGTTACCAAAATCACTTTAGAGTCTTTTCTTGCATGGA
AGAAAAGGAAAAGACAAGAAAAGATTGACAAACTTGAGCAAGATATGGAAAGAAGAAAAGCAGACTTTAAGGCAGGAAAA
GCACTAGTGATCAGTGGCCGCGAAGTTTTTGAATTTCGTCCTGAACTGGTTGATGATGATGATGAAGAAGCAGATGATAC
TCGATATACTCAAGGAACTGGTGGTGATGAGGTTGAAGACCTAATAAGAATAAATGATATAGATTTGAGCCAGTATGTCC
CAAAGGATGTGGATGAGACTGGTATTACTGTGGCTAGTCTTGAAAGATTCAGTACATATACTTCCATAGAGAAGGATGAT
AATAAATTGAGTGAAGCTTCAGGAGGTGGGGCAGAAAATGGAGAACAAAGTGATTTGGAAGAAAATAATGAAGAACAGGA
AAATGGAGTGATTGGTGCTGTTCCTGTTGATGAAAACCTTTTTACTGGAGAGGATTTGGATGAACTTGAAGAAGAATTAA
ACACACTTGATTTAGAGGAATGA
ATGTACCGTCATGCTCTTCCTCCTGGTTTTGTATTAAAAAAAGATAAGAAGAAAGAAGAAAAAGAAGATGAAATTTCATT
AGAAGATCTAATTGAAAGAGAGCGTTCTGCTTTAGGACCAAATGTTACCAAAATCACTTTAGAGTCTTTTCTTGCATGGA
AGAAAAGGAAAAGACAAGAAAAGATTGACAAACTTGAGCAAGATATGGAAAGAAGAAAAGCAGACTTTAAGGCAGGAAAA
GCACTAGTGATCAGTGGCCGCGAAGTTTTTGAATTTCGTCCTGAACTGGTTGATGATGATGATGAAGAAGCAGATGATAC
TCGATATACTCAAGGAACTGGTGGTGATGAGGTTGAAGACCTAATAAGAATAAATGATATAGATTTGAGCCAGTATGTCC
CAAAGGATGTGGATGAGACTGGTATTACTGTGGCTAGTCTTGAAAGATTCAGTACATATACTTCCATAGAGAAGGATGAT
AATAAATTGAGTGAAGCTTCAGGAGGTGGGGCAGAAAATGGAGAACAAAGTGATTTGGAAGAAAATAATGAAGAACAGGA
AAATGGAGTGATTGGTGCTGTTCCTGTTGATGAAAACCTTTTTACTGGAGAGGATTTGGATGAACTTGAAGAAGAATTAA
ACACACTTGATTTAGAGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021762 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011958 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005931 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000012965 | ortholog_many2many | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000011664 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000001563 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007741 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011903 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002182 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000015790 | ortholog_many2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012717 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000005256 | ortholog_many2many | 4 retrogenes | |
| Sorex araneus | ENSSARG00000012071 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_871 | 93.12 | 85.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1230 | 73.17 | 55.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1321 | 89.80 | 66.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1744 | 88.89 | 90.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_1942 | 95.90 | 88.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000027565 retrocopies