Parental gene:

MRPL47, ENSMODG00000021301

Aliases:None
Description:mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:16652]
Organism:Opossum (Monodelphis domestica)
Coordinates:7:202680055..202697417(-)


>ENSMODG00000021301
TTTCATTGTTGGTTTTTTGTGCTCATTTGTAGGTTTACTTTCAGTTTGTTAAACAAGATTAGAGCCAACATCAATCCCTT
CCATCAATATAAATTAATTCATACTACTTTGTCAAGGAAAGGACTAGAAGAATTTTTTGATGATCCAAAAAATTGGGGAG
CAGAAACAGTCAAATCAGGTGCCGCATGGACCCATGAACAGTTAAGGTGCAAGAGTAATGAAGATTTGCATAAGCTTTGG
TATGTCCTGCTGAAAGAAAGAAACATGCTTCTCACTTTAGAGCAGGAGGCCAAAAGACAGAGATTGCCAATGCCAAGTCC
AGAGCGATTAGAAAAGGTAACAGAGTCCATGGATGCTTTAGATAAAGTGGTTCAGGAAAGAGATGATGCTTTGAGACTTC
TTCAGACAGGTCAAGAATACCCAAGACCAGGTGACTGGAGGAAAGACATTTTTGGGCACATCATCTGGTACAAGTACAAG
CAGTGGCCAATACCCTGGTACCTCAACAAAAGATACACCAAAAAGAAGTACTTTACAATGCCTTTTGTGGATAAGTTTGT
CAGACTGAGGCTTGAAAAGTACTTACGTAGTGAAACCAAGAAGAAGAATTTAAAGAGAAGGAAAGAGAAGATACTTCAAA
GAAAATTTCCACACATGTCTGCTGAAGCGCAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011380 ortholog_one2one 1 retrogene
retro_cfam_1085,
Cavia porcellus ENSCPOG00000002312 ortholog_one2one 2 retrogenes
retro_cpor_1219, retro_cpor_885,
Felis catus ENSFCAG00000031548 ortholog_one2one 1 retrogene
retro_fcat_235,
Macropus eugenii ENSMEUG00000012649 ortholog_one2one 2 retrogenes
retro_meug_1039, retro_meug_146,
Mustela putorius furo ENSMPUG00000017214 ortholog_one2one 1 retrogene
retro_mputfur_495,
Mus musculus ENSMUSG00000037531 ortholog_one2one 3 retrogenes
retro_mmus_1976, retro_mmus_1986, retro_mmus_2753,
Otolemur garnettii ENSOGAG00000016957 ortholog_one2one 2 retrogenes
retro_ogar_1900, retro_ogar_3015,
Pteropus vampyrus ENSPVAG00000004284 ortholog_one2one 1 retrogene
retro_pvam_150,
Rattus norvegicus ENSRNOG00000011639 ortholog_one2one 2 retrogenes
retro_rnor_1829, retro_rnor_2523,
Sorex araneus ENSSARG00000006898 ortholog_one2one 2 retrogenes
retro_sara_269, retro_sara_721,
Tursiops truncatus ENSTTRG00000008909 ortholog_one2one 1 retrogene
retro_ttru_420,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_562 78.26 51.34
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2. retro_mdom_1361 82.46 50.45
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3. retro_mdom_1879 96.71 95.09
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Download FASTA sequences of all ENSMODG00000021301 retrocopies