Parental gene: | DDX5, ENSMODG00000003743 |
| Aliases: | None |
| Description: | DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:HGNC Symbol;Acc:2746] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 2:229955211..229962137(+) |
>ENSMODG00000003743
GGCGGTCCAGGTATAAAACCGGCTGCCGGGAGCCCTCTGGCTCCTCATTCATTTCCACCGGCTTGGGTTCCTCTTGTTTC
AGCTGCAGCCTCCGTCTCAGCCACCGCCCCCGCAGGCCTCGCGACCGCCGAAGCCGCCTTTCCCCCCTTCCCCTGCGACT
TCCCGCTTCTCCTCGGTTGCTTCCCTCTAACCGCAACCATTGACGCCATGTCTGGATATTCGAGTGACAGAGACCGCGGT
CGGGATCGAGGGTTTGGGGCCCCTAGGTTTGGAGGAAGTAGAGGAGGACCTCTATCTGGAAAGAAATTTGGAAATCCTGG
GGAGAAACTCATTAAAAAGAAATGGAATCTCGAGGAACTGCCCAAATTTGAGAAGAATTTTTATCAGGAACATCCTGATT
TGGCGAGGCGCACAGCACAAGAGGTTGAGACATATCGGAGAAGCAAAGAAATTACAGTACGAGGTCACAACTGCCCAAAA
CCAATTCTAAATTTCTATGAAGCAAATTTTCCTGCAAATGTCATGGATGTAATTGCAAGACAGAACTTTACTGAACCTAC
TGCTATCCAAGCCCAAGGGTGGCCTGTTGCTCTAAGTGGGCTGGATATGGTTGGAGTAGCACAGACTGGATCAGGGAAAA
CACTGTCTTATTTGCTGCCTGCCATTGTCCACATAAATCACCAGCCATTCCTAGAGAGAGGTGATGGGCCTATTTGTTTG
GTGCTGGCGCCAACTCGTGAACTGGCCCAACAGGTACAACAAGTAGCTGCTGAATACAGTAGAGCATGTCGTCTAAAATC
CACTTGCATTTATGGTGGTGCTCCAAAGGGACCACAAATACGGGACTTGGAAAGAGGTGTAGAAATTTGCATTGCAACAC
CTGGACGACTGATAGACTTTTTAGAGTGTGGGAAAACTAATTTGAGAAGAACTACTTACCTTGTACTTGACGAAGCAGAC
AGAATGCTTGATATGGGCTTTGAGCCTCAAATCAGGAAAATTGTTGATCAGATAAGACCTGATAGACAAACCCTAATGTG
GAGTGCGACATGGCCAAAAGAAGTAAGGCAGCTTGCTGAAGACTTTTTGAAAGATTATATTCATATCAACATTGGTGCTC
TGGAACTGAGTGCAAACCATAATATTCTTCAGATTGTGGATGTGTGTCATGATGTAGAAAAGGATGAGAAACTTATTCGA
TTGATGGAGGAGATCATGAGCGAAAAGGAAAATAAGACTATTGTTTTTGTGGAAACTAAAAGAAGATGTGATGAACTTAC
CAGGAAAATGAGGAGAGATGGGTGGCCTGCAATGGGTATCCATGGTGACAAGAGTCAACAGGAGCGAGACTGGGTTCTAA
ATGAATTCAAACATGGAAAAGCTCCTATCCTGATTGCCACAGATGTTGCATCGAGAGGGCTAGATGTGGAAGATGTGAAA
TTTGTCATCAATTATGACTACCCTAACTCTTCAGAGGATTATATCCACCGAATTGGACGAACTGCCCGTAGTACCAAAAC
AGGCACAGCATATACATTCTTTACACCTAATAACATAAAACAAGTAAGCGACCTCATCTCTGTGCTTCGGGAGGCTAATC
AAGCAATCAATCCCAAATTGCTTCAGTTGATTGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGAT
GATCGACGTGACAGATACTCTGCGGGCAAAAGGGGTGGATTTAATACCTTTAGGGACAGGGAAAATTATGACAGAGGTTA
TTCTAGTCTGCTTAAGAGAGATTTTGGGGCAAAAACTCAGAATGGTGTCTACAGTGCTGCAAGCTACACCAATGGGAGCT
TTGGAAGTAATTTTGTGTCTGCTGGTATACAGACTAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAGAATGGTTAT
GACAGTACACAGCAATATGGAAATAATGTCCCAAATATGCACAATGGCATGAACCAACAGGCATATGCATATCCTGCTAC
TGCAGCTGCACCTATGATAGGTTATCCAATGCCAACAGGATATTCTCAATAA
GGCGGTCCAGGTATAAAACCGGCTGCCGGGAGCCCTCTGGCTCCTCATTCATTTCCACCGGCTTGGGTTCCTCTTGTTTC
AGCTGCAGCCTCCGTCTCAGCCACCGCCCCCGCAGGCCTCGCGACCGCCGAAGCCGCCTTTCCCCCCTTCCCCTGCGACT
TCCCGCTTCTCCTCGGTTGCTTCCCTCTAACCGCAACCATTGACGCCATGTCTGGATATTCGAGTGACAGAGACCGCGGT
CGGGATCGAGGGTTTGGGGCCCCTAGGTTTGGAGGAAGTAGAGGAGGACCTCTATCTGGAAAGAAATTTGGAAATCCTGG
GGAGAAACTCATTAAAAAGAAATGGAATCTCGAGGAACTGCCCAAATTTGAGAAGAATTTTTATCAGGAACATCCTGATT
TGGCGAGGCGCACAGCACAAGAGGTTGAGACATATCGGAGAAGCAAAGAAATTACAGTACGAGGTCACAACTGCCCAAAA
CCAATTCTAAATTTCTATGAAGCAAATTTTCCTGCAAATGTCATGGATGTAATTGCAAGACAGAACTTTACTGAACCTAC
TGCTATCCAAGCCCAAGGGTGGCCTGTTGCTCTAAGTGGGCTGGATATGGTTGGAGTAGCACAGACTGGATCAGGGAAAA
CACTGTCTTATTTGCTGCCTGCCATTGTCCACATAAATCACCAGCCATTCCTAGAGAGAGGTGATGGGCCTATTTGTTTG
GTGCTGGCGCCAACTCGTGAACTGGCCCAACAGGTACAACAAGTAGCTGCTGAATACAGTAGAGCATGTCGTCTAAAATC
CACTTGCATTTATGGTGGTGCTCCAAAGGGACCACAAATACGGGACTTGGAAAGAGGTGTAGAAATTTGCATTGCAACAC
CTGGACGACTGATAGACTTTTTAGAGTGTGGGAAAACTAATTTGAGAAGAACTACTTACCTTGTACTTGACGAAGCAGAC
AGAATGCTTGATATGGGCTTTGAGCCTCAAATCAGGAAAATTGTTGATCAGATAAGACCTGATAGACAAACCCTAATGTG
GAGTGCGACATGGCCAAAAGAAGTAAGGCAGCTTGCTGAAGACTTTTTGAAAGATTATATTCATATCAACATTGGTGCTC
TGGAACTGAGTGCAAACCATAATATTCTTCAGATTGTGGATGTGTGTCATGATGTAGAAAAGGATGAGAAACTTATTCGA
TTGATGGAGGAGATCATGAGCGAAAAGGAAAATAAGACTATTGTTTTTGTGGAAACTAAAAGAAGATGTGATGAACTTAC
CAGGAAAATGAGGAGAGATGGGTGGCCTGCAATGGGTATCCATGGTGACAAGAGTCAACAGGAGCGAGACTGGGTTCTAA
ATGAATTCAAACATGGAAAAGCTCCTATCCTGATTGCCACAGATGTTGCATCGAGAGGGCTAGATGTGGAAGATGTGAAA
TTTGTCATCAATTATGACTACCCTAACTCTTCAGAGGATTATATCCACCGAATTGGACGAACTGCCCGTAGTACCAAAAC
AGGCACAGCATATACATTCTTTACACCTAATAACATAAAACAAGTAAGCGACCTCATCTCTGTGCTTCGGGAGGCTAATC
AAGCAATCAATCCCAAATTGCTTCAGTTGATTGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGAT
GATCGACGTGACAGATACTCTGCGGGCAAAAGGGGTGGATTTAATACCTTTAGGGACAGGGAAAATTATGACAGAGGTTA
TTCTAGTCTGCTTAAGAGAGATTTTGGGGCAAAAACTCAGAATGGTGTCTACAGTGCTGCAAGCTACACCAATGGGAGCT
TTGGAAGTAATTTTGTGTCTGCTGGTATACAGACTAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAGAATGGTTAT
GACAGTACACAGCAATATGGAAATAATGTCCCAAATATGCACAATGGCATGAACCAACAGGCATATGCATATCCTGCTAC
TGCAGCTGCACCTATGATAGGTTATCCAATGCCAACAGGATATTCTCAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000019950 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003512 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000009496 | ortholog_one2one | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000018546 | other_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000020719 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000001932 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000030680 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009490 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012149 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008793 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1519 | 89.08 | 59.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1520 | 88.59 | 59.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1955 | 84.10 | 73.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1956 | 88.09 | 59.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000003743 retrocopies