Parental gene:

ENSMODG00000018546

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:2:325341490..325359489(+)


>ENSMODG00000018546
ATGTCCACCAAAGAAACCCACAGTAACTGCGCCTCCCGCAACCCAAGTGCCGCCTCTCGGGGCCCGGCCCCTGACAAGAA
GACTCCCACAGCGCCCCCTCGGGCGGCAGGCGGCAGTGCAAGGGGGCGGGGTAGCGGCAGCAGCGGCACCGCCCGCGGAG
GCTCCCGTGGGCCCTCAGGAGTCCTAGAGTACCGGGCCCGAAGCTCCTGTTTCAGAGAAGCGCCGCTCTGTTTTAAACTC
GACAGCTCTGTCGTCGGGGCGGTCATAGGTCGGGGTGGAACAAAAATAAAGGAAATTCAAGAATCAACAGGTTCTAAAAT
TCAGATAATAAAAGGAGATTCCGAGTCAGAAACCAGAATATATGGCAACAAGGAGAACCAGAAATCAGCTAAGCTAATGA
TAGAGGAAATAGTAAAAAAAATAGAAAAGTATTCTAAAGAGGACACAAAAATCGGAAACACTTTGAAATCATCTTGTAAT
GAAAATGGCCCAGATAAAAAAGTACCAGTGATTGATTGGGAGGCTATTAAACAAGACCACCTCCACTACATTAAAACAAA
GTGGGACGGTCTTCCCCCAATTAAGAAAGATTTCTACATAGAATCTTCAAAAACAAAATTAATGTCCCAAACACAAGTAG
ATAAGTGGAGGGAAGAAAACAATAATATAATGTGTGATGACTTAAGAGAAAATGAAAAACGTATAATTCCTAATCCAGTG
TGTACATTTGAAGATGCATTTGATCATTATCCTGATGTTATGGCCAATATAAAGAAAGTAGGTTTCACAAGACCTACACC
TATACAGTCACAAGCATGGCCAATAATATTAAAAGGAATTGATCTAATTGGCATTGCCCAAACCGGCACAGGAAAGACCT
TGGCCTATTTAATGCCAGGATTTATTCATCTTGACCTACAGCCAGAAACTAGGGAAAAAAGAGATGGTCCTGGAATGCTA
GTGCTGACGCCAACCAGAGAATTAGCTCTACAAGTTGAGAGTGAATGTAAAAAATATACCTATAAAGGAATTAAAAGCAT
TTGTATATATGGTGGTGGAGACAGAAGAGGTCAGATTGAACATGTTACTAAGGGTGTGGATATTGTCATTGCCACCCCTG
GTAGACTGAATGATCTTCAGATGAATGAATTCATCAACCTGAATAGCATCACATATTTGGTTCTAGATGAGGCTGATAAA
ATGTTAGATATGGGGTTTGAACCACAGATAATGAAGATTTTATTGGATGTACGGCCAGATAGACAAACTATTATGACCAG
CGCTACGTGGCCTGATGCCGTGCGCCGCCTTTCGCAGAAGTATTTGAACGACCCGATGATTGTTTATGTTGGAACCCTGG
ATCTCGCCGCCGTAAATACTGTAAAGCAGAAAATAATCATAACCACAGAACAGGAAAAGCCAGCTCTTATACATTCCTTC
ATTGATTCAATGAAGCCAGAAGATAAAGTAATCATTTTCGTAGGCAGAAAACTTATTGCTGATGATATATCCAGTGACTT
GAGCATTAAGGGTTTACCTGTACAGTCGCTACATGGCAACCGAGAACAAAGTGATCGTGAGCGAGCTCTGAACGAGTTTA
AAACAGGAATAGTAAGAATATTGATAGCAACAGATCTGGCCTCACGAGGTCTTGATGTCTTGGACATCACCCACGTTTTT
AACTTTGATTTTCCTCGAAACCTTGAAGAGTATGTCCATAGAGTAGGACGTACTGGAAGAGCTGGGCATACAGGGGAATC
AATTACTCTGCTTACTAGGAACGATTGGAAAATAGCTGGTGAATTAATCAATATTTTGGAGAGAGCCAACCAGGAAATTC
CAAATGAGCTTATATTAATGGCTGAACGATATAAACAGCACAAGCAGAAAAAAGATGAAGAAAGAAACATGGCAAGAACT
CGTGGAAGGACAAGAAACATTTATTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007851 ortholog_many2many 1 retrogene
retro_amel_31,
Callithrix jacchus ENSCJAG00000009966 ortholog_one2many 2 retrogenes
retro_cjac_3639, retro_cjac_3640,
Equus caballus ENSECAG00000017971 ortholog_many2many 1 retrogene
retro_ecab_7,
Felis catus ENSFCAG00000031631 ortholog_many2many 1 retrogene
retro_fcat_583,
Homo sapiens ENSG00000080007 ortholog_many2many 1 retrogene
retro_hsap_76,
Gorilla gorilla ENSGGOG00000016092 ortholog_one2many 1 retrogene
retro_ggor_2889,
Microcebus murinus ENSMICG00000017145 ortholog_one2many 1 retrogene
retro_mmur_1603,
Monodelphis domestica ENSMODG00000003743 other_paralog 4 retrogenes
retro_mdom_1519, retro_mdom_1520, retro_mdom_1955, retro_mdom_1956,
Mustela putorius furo ENSMPUG00000004342 ortholog_many2many 1 retrogene
retro_mputfur_47,
Nomascus leucogenys ENSNLEG00000001209 ortholog_one2many 1 retrogene
retro_nleu_1094,
Oryctolagus cuniculus ENSOCUG00000006338 ortholog_many2many 2 retrogenes
retro_ocun_1061, retro_ocun_227,
Otolemur garnettii ENSOGAG00000013660 ortholog_many2many 1 retrogene
retro_ogar_227,
Procavia capensis ENSPCAG00000005962 ortholog_one2many 1 retrogene
retro_pcap_151,
Pongo abelii ENSPPYG00000016774 ortholog_many2many 1 retrogene
retro_pabe_39,
Pan troglodytes ENSPTRG00000018344 ortholog_many2many 1 retrogene
retro_ptro_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_14 70.21 90.12
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Download FASTA sequences of all ENSMODG00000018546 retrocopies