Parental gene:

MMU.4146, ENSMMUG00000012044

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:9:121573108..121591667(-)


>ENSMMUG00000012044
ATGTCTGGGGACAGCAGCGGCCGCGGGACCGAGGGCCGGGGTCGGGGCCGCGACCCGCACCGGGATCGGACCTGCTCCCG
CTCCCGCTCGCGGTCCCCACTGTCGCCCAGGTCCCGCCGCGGCTCCGCGCCGGAGCGCAGGGAAGCCCCAGAGCGCCCGA
GCCTGGAGGACACAGAGCCGTCGGATTCCGGGGACGAGATGATGGACCCGGCCAGCTTGGAGGCGGAGGCCGACCAAGGC
CTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCTGTCCAACAAAACCGGGAGGACATACTGAATGCTGG
TGACAAATTAACAGAGGTCCTTGAAGAGGCTAACACTCTGTTTAATGAAGTGTCCCGAGCAAGAGAAGCAGTCCTAGATG
CCCACTTTCTTGTTTTGGCTTCCGATTTGGGCAAAGAGAAAGCAAAGCAGCTGCGCTCAGACCTGAGTTCCTTTGACATG
TTAAGATATGTTGAAACTCTACTCACACATATGGGTGTAAATCCGCTAGAAGCTGAAGAACTTATCCGTGATGAAGATAG
TCCTGATTTTGAATTCATCGTCTATGACTCCTGGAAAATATCAGGCAAAACAGCAGAAAACACCTTTAATAAAACCCATA
CATTCCACTTTCTGTTGGGTTCCATATACGGAGAGTGCCCTGTGCCAAAGCCACGAGTCGACCGTCCAAGAAAAGTTCCT
ATGATACAAGAGGAGAGGGCAATGCCTGCCCAGTTAAGAAGAATGGAAGAATCTCATCAAGAAGCAACAGAGAAAGAAGT
AGAAAGAATTTTGGGATTGTTGCAGACATATTTTCAAGAAGATCCTGATACCCCAATGTCCTTCTTTGACTTTGTGGTTG
ATCCTCATTCTTTCCCCCGTACAGTGGAAAACATCTTTCATGTTTCCTTCATTATACGGGATGGTTTTGCAAGAATAAGA
CTTGACCAAGACCGACTGCCAATAATAGAGCCTGTTAGTATTAATGAAGAAAATGAGGGATTTGAACATAACACACAAGT
TAGGAATCAAGGAATTATAGCTTTGAGTTACCGTGACTGGGAGGAGATTGTGAAGACCTTTGAGATTTCAGAGCCTGTGA
TTACTCCAAGTCAGAGGCAGCAGAAGCTAAGTGCTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .92 RPM
SRP007412_brain 6 .39 RPM
SRP007412_cerebellum 15 .95 RPM
SRP007412_heart 5 .12 RPM
SRP007412_kidney 6 .57 RPM
SRP007412_liver 1 .98 RPM
SRP007412_testis 1 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010897 ortholog_one2one 1 retrogene
retro_amel_419,
Bos taurus ENSBTAG00000019166 ortholog_one2one 1 retrogene
retro_btau_1387,
Canis familiaris ENSCAFG00000012419 ortholog_one2one 2 retrogenes
retro_cfam_1427, retro_cfam_379,
Choloepus hoffmanni ENSCHOG00000003695 ortholog_one2one 1 retrogene
retro_chof_577,
Dipodomys ordii ENSDORG00000003880 ortholog_one2one 1 retrogene
retro_dord_677,
Equus caballus ENSECAG00000016651 ortholog_one2one 2 retrogenes
retro_ecab_109, retro_ecab_465,
Erinaceus europaeus ENSEEUG00000014906 ortholog_one2one 1 retrogene
retro_eeur_124,
Felis catus ENSFCAG00000003647 ortholog_one2one 1 retrogene
retro_fcat_994,
Homo sapiens ENSG00000107672 ortholog_one2one 1 retrogene
retro_hsap_43,
Loxodonta africana ENSLAFG00000004214 ortholog_one2one 1 retrogene
retro_lafr_1051,
Mustela putorius furo ENSMPUG00000002960 ortholog_one2one 1 retrogene
retro_mputfur_396,
Nomascus leucogenys ENSNLEG00000016919 ortholog_one2one 1 retrogene
retro_nleu_2073,
Otolemur garnettii ENSOGAG00000010026 ortholog_one2one 1 retrogene
retro_ogar_280,
Pongo abelii ENSPPYG00000002712 ortholog_one2one 1 retrogene
retro_pabe_878,
Pteropus vampyrus ENSPVAG00000017186 ortholog_one2one 2 retrogenes
retro_pvam_1163, retro_pvam_795,
Rattus norvegicus ENSRNOG00000020452 ortholog_one2one 1 retrogene
retro_rnor_2515,
Ictidomys tridecemlineatus ENSSTOG00000011112 ortholog_one2one 1 retrogene
retro_itri_36,
Vicugna pacos ENSVPAG00000006534 ortholog_one2one 1 retrogene
retro_vpac_260,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_716 54.57 81.82
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Download FASTA sequences of all ENSMMUG00000012044 retrocopies