Parental gene:

NSMCE4A, ENSG00000107672

Aliases:NSMCE4A, C10orf86, NS4EA, NSE4A
Description:non-SMC element 4 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:25935]
Organism:Human (Homo sapiens)
Coordinates:10:123716602..123734732(-)


>ENSG00000107672
ATGTCTGGGGACAGCAGCGGCCGCGGGCCAGAGGGCCGGGGCCGGGGCCGCGACCCGCATCGGGATCGCACCCGCTCCCG
CTCCCGCTCGCGGTCCCCTTTGTCGCCCAGGTCCCGCCGCGGCTCTGCGCGGGAGCGCAGAGAGGCCCCAGAGCGCCCGA
GCCTGGAGGACACAGAGCCGTCGGATTCCGGGGACGAGATGATGGACCCGGCCAGCTTGGAGGCGGAGGCCGACCAAGGC
CTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCAACTCCGTCCAACAAAACCGTGAGGACATACTGAATGCCGG
TGACAAATTAACAGAGGTCCTTGAAGAGGCTAACACTCTGTTTAATGAAGTGTCCCGAGCAAGAGAAGCAGTCCTGGATG
CCCACTTTCTTGTTTTGGCTTCAGATTTGGGCAAAGAGAAAGCAAAGCAGCTGCGCTCAGACCTGAGCTCCTTTGACATG
TTAAGATATGTTGAAACTCTACTCACACATATGGGTGTAAATCCGCTAGAAGCTGAAGAACTCATCCGTGATGAAGATAG
TCCTGATTTTGAATTCATAGTCTATGACTCCTGGAAGATAACAGGCAGAACAGCAGAAAACACCTTTAATAAAACCCATA
CATTCCACTTTCTGTTGGGTTCAATATACGGAGAGTGCCCTGTGCCAAAGCCACGAGTTGATCGTCCAAGAAAAGTTCCT
GTGATACAAGAGGAGAGGGCAATGCCTGCCCAGTTAAGAAGAATGGAAGAATCTCATCAAGAAGCAACAGAGAAAGAAGT
AGAAAGAATCTTGGGATTGTTGCAGACATATTTTCGAGAAGATCCTGATACCCCAATGTCCTTCTTTGACTTTGTGGTTG
ATCCTCATTCTTTCCCCCGTACAGTGGAAAACATCTTTCATGTTTCCTTCATTATACGGGATGGTTTTGCAAGAATAAGA
CTTGACCAAGACCGACTGCCAGTAATAGAGCCTGTTAGTATTAATGAAGAAAATGAGGGATTTGAACATAACACACAAGT
TAGAAATCAAGGAATTATAGCTTTGAGTTACCGTGACTGGGAGGAGATTGTGAAGACCTTTGAGATTTCAGAGCCTGTGA
TTACTCCAAGTCAGAGGCAGCAGAAGCCAAGTGCTTGA

Library Parental gene expression (RPM)
bodymap2_liver 16 .81 RPM
bodymap2_lung 17 .58 RPM
bodymap2_breast 42 .53 RPM
bodymap2_adipose 17 .89 RPM
bodymap2_adrenal 38 .97 RPM
bodymap2_skeletal_muscle 15 .64 RPM
bodymap2_thyroid 27 .44 RPM
bodymap2_prostate 44 .56 RPM
bodymap2_colon 22 .00 RPM
bodymap2_testis 13 .20 RPM
bodymap2_brain 10 .92 RPM
bodymap2_heart 12 .94 RPM
bodymap2_white_blood_cells 15 .87 RPM
bodymap2_lymph_node 31 .65 RPM
bodymap2_ovary 31 .50 RPM
bodymap2_kidney 20 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010897 ortholog_one2one 1 retrogene
retro_amel_419,
Bos taurus ENSBTAG00000019166 ortholog_one2one 1 retrogene
retro_btau_1387,
Canis familiaris ENSCAFG00000012419 ortholog_one2one 2 retrogenes
retro_cfam_1427, retro_cfam_379,
Choloepus hoffmanni ENSCHOG00000003695 ortholog_one2one 1 retrogene
retro_chof_577,
Dipodomys ordii ENSDORG00000003880 ortholog_one2one 1 retrogene
retro_dord_677,
Equus caballus ENSECAG00000016651 ortholog_one2one 2 retrogenes
retro_ecab_109, retro_ecab_465,
Erinaceus europaeus ENSEEUG00000014906 ortholog_one2one 1 retrogene
retro_eeur_124,
Felis catus ENSFCAG00000003647 ortholog_one2one 1 retrogene
retro_fcat_994,
Loxodonta africana ENSLAFG00000004214 ortholog_one2one 1 retrogene
retro_lafr_1051,
Macaca mulatta ENSMMUG00000012044 ortholog_one2one 1 retrogene
retro_mmul_716,
Mustela putorius furo ENSMPUG00000002960 ortholog_one2one 1 retrogene
retro_mputfur_396,
Nomascus leucogenys ENSNLEG00000016919 ortholog_one2one 1 retrogene
retro_nleu_2073,
Otolemur garnettii ENSOGAG00000010026 ortholog_one2one 1 retrogene
retro_ogar_280,
Pongo abelii ENSPPYG00000002712 ortholog_one2one 1 retrogene
retro_pabe_878,
Pteropus vampyrus ENSPVAG00000017186 ortholog_one2one 2 retrogenes
retro_pvam_1163, retro_pvam_795,
Rattus norvegicus ENSRNOG00000020452 ortholog_one2one 1 retrogene
retro_rnor_2515,
Ictidomys tridecemlineatus ENSSTOG00000011112 ortholog_one2one 1 retrogene
retro_itri_36,
Vicugna pacos ENSVPAG00000006534 ortholog_one2one 1 retrogene
retro_vpac_260,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_43 52.68 81.82
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Download FASTA sequences of all ENSG00000107672 retrocopies