Parental gene:

MRPL42, ENSG00000198015

Aliases:MRPL42, L31MT, L42MT, MRP-L31, MRP-L42, MRP-S32, MRPL31, MRPS32, PTD007, RPML31, S32MT
Description:mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:14493]
Organism:Human (Homo sapiens)
Coordinates:12:93861263..93897545(+)


>ENSG00000198015
ATGGCTGTAGCTGCAGTAAAATGGGTGATGTCAAAGAGAACTATCTTGAAACATTTATTTCCAGTCCAAAATGGAGCTTT
ATATTGTGTTTGTCATAAATCTACGTATTCTCCTCTACCAGATGACTATAATTGCAACGTAGAGCTTGCTCTGACTTCTG
ATGGCAGGACAATAGTATGCTACCACCCTTCTGTGGACATTCCATATGAACACACAAAACCTATCCCTCGGCCAGATCCT
GTGCATAATAATGAAGAAACACATGATCAAGTGCTGAAAACCAGATTGGAAGAAAAAGTTGAACACCTTGAGGAAGGACC
TATGATAGAACAACTTAGCAAAATGTTCTTTACTACTAAGCACCGTTGGTATCCTCATGGACGGTATCACAGATGTCGTA
AGAATCTGAATCCTCCAAAAGACAGATGA

Library Parental gene expression (RPM)
bodymap2_liver 24 .10 RPM
bodymap2_lung 29 .64 RPM
bodymap2_breast 23 .85 RPM
bodymap2_adipose 26 .40 RPM
bodymap2_adrenal 35 .88 RPM
bodymap2_skeletal_muscle 18 .35 RPM
bodymap2_thyroid 33 .75 RPM
bodymap2_prostate 36 .75 RPM
bodymap2_colon 31 .92 RPM
bodymap2_testis 54 .73 RPM
bodymap2_brain 24 .66 RPM
bodymap2_heart 31 .31 RPM
bodymap2_white_blood_cells 32 .45 RPM
bodymap2_lymph_node 32 .82 RPM
bodymap2_ovary 39 .34 RPM
bodymap2_kidney 53 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009832 ortholog_one2one 1 retrogene
retro_amel_403,
Bos taurus ENSBTAG00000002708 ortholog_one2one 3 retrogenes
retro_btau_1395, retro_btau_346, retro_btau_775,
Callithrix jacchus ENSCJAG00000032825 ortholog_one2one 4 retrogenes
retro_cjac_1541, retro_cjac_3684, retro_cjac_3966, retro_cjac_722,
Gorilla gorilla ENSGGOG00000022760 ortholog_one2one 5 retrogenes
retro_ggor_1983, retro_ggor_2317, retro_ggor_2385, retro_ggor_2483, retro_ggor_2589,
Loxodonta africana ENSLAFG00000013779 ortholog_one2one 1 retrogene
retro_lafr_681,
Macaca mulatta ENSMMUG00000016805 ortholog_one2one 3 retrogenes
retro_mmul_1751, retro_mmul_1850, retro_mmul_2210,
Nomascus leucogenys ENSNLEG00000005699 ortholog_one2one 5 retrogenes
retro_nleu_1364, retro_nleu_1724, retro_nleu_1979, retro_nleu_493, retro_nleu_606,
Oryctolagus cuniculus ENSOCUG00000010928 ortholog_one2one 7 retrogenes
retro_ocun_1321, retro_ocun_1378, retro_ocun_1497, retro_ocun_1716, retro_ocun_1717, retro_ocun_622, retro_ocun_686,
Ochotona princeps ENSOPRG00000010967 ortholog_one2one 5 retrogenes
retro_opri_190, retro_opri_51, retro_opri_653, retro_opri_747, retro_opri_997,
Procavia capensis ENSPCAG00000003791 ortholog_one2one 1 retrogene
retro_pcap_179,
Pongo abelii ENSPPYG00000004833 ortholog_one2one 7 retrogenes
retro_pabe_1286, retro_pabe_2368, retro_pabe_2840, retro_pabe_2914, retro_pabe_3031, retro_pabe_3054, retro_pabe_3552,
Pan troglodytes ENSPTRG00000022791 ortholog_one2one 3 retrogenes
retro_ptro_1046, retro_ptro_2327, retro_ptro_2396,
Rattus norvegicus ENSRNOG00000042740 possible_ortholog 4 retrogenes
retro_rnor_1383, retro_rnor_633, retro_rnor_729, retro_rnor_920,
Sus scrofa ENSSSCG00000030478 ortholog_one2one 4 retrogenes
retro_sscr_504, retro_sscr_505, retro_sscr_912, retro_sscr_946,
Ictidomys tridecemlineatus ENSSTOG00000026544 ortholog_one2many 12 retrogenes
retro_itri_1020, retro_itri_1132, retro_itri_1266, retro_itri_1285, retro_itri_1353, retro_itri_1695, retro_itri_1793, retro_itri_268, retro_itri_284, retro_itri_393, retro_itri_558, retro_itri_899,
Tarsius syrichta ENSTSYG00000006370 ortholog_one2one 3 retrogenes
retro_tsyr_1296, retro_tsyr_2113, retro_tsyr_276,
Tursiops truncatus ENSTTRG00000003312 ortholog_one2one 2 retrogenes
retro_ttru_1632, retro_ttru_416,
Vicugna pacos ENSVPAG00000007658 ortholog_one2one 1 retrogene
retro_vpac_336,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3427 69.01 100.00
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2. retro_hsap_3528 72.12 71.13
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3. retro_hsap_3844 57.00 67.61
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Download FASTA sequences of all ENSG00000198015 retrocopies