Parental gene:

OSTF1, ENSG00000134996

Aliases:OSTF1, OSF, SH3P2, bA235O14.1
Description:osteoclast stimulating factor 1 [Source:HGNC Symbol;Acc:8510]
Organism:Human (Homo sapiens)
Coordinates:9:77703458..77762181(+)


>ENSG00000134996
ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGGCAAGTTAAAGTCTTCAGAGCCCTGTATACGTTTGAACCCAGAAC
TCCAGATGAATTATACTTTGAGGAAGGTGATATTATCTACATTACTGACATGAGCGATACCAATTGGTGGAAAGGCACCT
CCAAAGGCAGGACTGGACTAATTCCAAGCAACTATGTGGCTGAGCAGGCAGAATCCATTGACAATCCATTGCATGAAGCA
GCAAAAAGAGGCAACTTGAGCTGGTTGAGAGAGTGTTTGGACAACAGAGTGGGTGTTAATGGCTTAGACAAAGCTGGAAG
CACTGCCTTATACTGGGCTTGCCACGGGGGCCACAAAGATATAGTGGAAATGCTATTTACTCAACCAAATATTGAACTGA
ACCAGCAGAACAAGTTGGGAGATACAGCTTTGCATGCTGCTGCCTGGAAGGGTTATGCAGATATCGTCCAGTTGCTTCTG
GCAAAAGGTGCTAGAACAGACTTAAGAAACATTGAGAAGAAGCTGGCCTTCGACATGGCTACCAATGCTGCCTGTGCATC
TCTCCTGAAAAAGAAACAGGGAACAGATGCAGTTCGAACATTAAGCAATGCCGAGGACTATCTCGATGATGAAGACTCAG
ATTAA

Library Parental gene expression (RPM)
bodymap2_liver 24 .46 RPM
bodymap2_lung 83 .67 RPM
bodymap2_breast 35 .02 RPM
bodymap2_adipose 72 .06 RPM
bodymap2_adrenal 61 .37 RPM
bodymap2_skeletal_muscle 6 .26 RPM
bodymap2_thyroid 26 .70 RPM
bodymap2_prostate 37 .65 RPM
bodymap2_colon 34 .19 RPM
bodymap2_testis 35 .59 RPM
bodymap2_brain 48 .61 RPM
bodymap2_heart 12 .96 RPM
bodymap2_white_blood_cells 168 .27 RPM
bodymap2_lymph_node 71 .12 RPM
bodymap2_ovary 30 .40 RPM
bodymap2_kidney 40 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012808 ortholog_one2one 1 retrogene
retro_cjac_3249,
Cavia porcellus ENSCPOG00000007226 ortholog_one2one 1 retrogene
retro_cpor_1049,
Dipodomys ordii ENSDORG00000002933 ortholog_one2one 1 retrogene
retro_dord_698,
Erinaceus europaeus ENSEEUG00000008320 ortholog_one2one 2 retrogenes
retro_eeur_545, retro_eeur_683,
Felis catus ENSFCAG00000022374 ortholog_one2one 1 retrogene
retro_fcat_1869,
Gorilla gorilla ENSGGOG00000011920 ortholog_one2one 1 retrogene
retro_ggor_836,
Macaca mulatta ENSMMUG00000010401 ortholog_one2one 1 retrogene
retro_mmul_836,
Nomascus leucogenys ENSNLEG00000001854 ortholog_one2one 1 retrogene
retro_nleu_2502,
Otolemur garnettii ENSOGAG00000002603 ortholog_one2one 1 retrogene
retro_ogar_2962,
Pongo abelii ENSPPYG00000019300 ortholog_one2one 1 retrogene
retro_pabe_883,
Pan troglodytes ENSPTRG00000021031 ortholog_one2one 1 retrogene
retro_ptro_720,
Rattus norvegicus ENSRNOG00000012156 ortholog_one2one 2 retrogenes
retro_rnor_936, retro_rnor_937,
Sus scrofa ENSSSCG00000005273 ortholog_one2one 1 retrogene
retro_sscr_979,
Tursiops truncatus ENSTTRG00000003081 ortholog_one2one 1 retrogene
retro_ttru_492,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1058 86.27 95.33
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Download FASTA sequences of all ENSG00000134996 retrocopies