Parental gene:

OSTF1, ENSCPOG00000007226

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_21:26181152..26232125(+)


>ENSCPOG00000007226
ATGTCGAAGCCGCCTCCCAAACCGGTCAAACCAGGGCAAGTTAAAGTCTTCAGAGCTCTTTATACCTTTGAACCCAGAAC
TCCAGATGAACTGTACTTCGAGGAGGGTGATGTTATCTACATTACTGACATGAGCGATAGCAATTGGTGGAAAGGAACCT
CCAAAGGCAGGACGGGACTAATCCCAAGCAACTACGGTGGCGAGCAGGCAGAATCTATTGACAATCCGTTGCACGAAGCT
GCCAAAAGAGGCAACCTGAGCTGGCTGAGGGAGTGTCTGGACAATCGTGTGGGTGTGAACGGCCTGGACAAAGCCGGAAG
CACTGCCTTGTACTGGGCGTGTCATGGGGGTCACAAAGATATAGTGGAAGTGCTGTTTACTCAGCCAAATATTGAACTGA
ACCAACAGAACAAGTTGGGGGACACAGCTCTGCATGCTGCTGCCTGGAAGGGCTACGCAGATATTGTCCAGTTGCTTTTG
GAAAAAGGTGCTAGAACGGACTTGCTGAACAACGAAAAGAAGCTGGCCTTGGACATGGCCACCAATGCTGCCTGCGCATC
GCTTCTGAAAAAGAAGCAGGGAACAGATGCAGTTCGATCATTAAGCAATGCCGAAGACTATCTTGATGATGAAGACTCAG
AT

Library Parental gene expression (RPM)
SRP017611_liver 20 .98 RPM
SRP017611_kidney 38 .11 RPM
SRP017611_brain 4 .72 RPM
SRP040447_lung 62 .40 RPM
SRP040447_skeletal_muscle 7 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012808 ortholog_one2one 1 retrogene
retro_cjac_3249,
Dipodomys ordii ENSDORG00000002933 ortholog_one2one 1 retrogene
retro_dord_698,
Erinaceus europaeus ENSEEUG00000008320 ortholog_one2one 2 retrogenes
retro_eeur_545, retro_eeur_683,
Felis catus ENSFCAG00000022374 ortholog_one2one 1 retrogene
retro_fcat_1869,
Homo sapiens ENSG00000134996 ortholog_one2one 1 retrogene
retro_hsap_1058,
Gorilla gorilla ENSGGOG00000011920 ortholog_one2one 1 retrogene
retro_ggor_836,
Macaca mulatta ENSMMUG00000010401 ortholog_one2one 1 retrogene
retro_mmul_836,
Nomascus leucogenys ENSNLEG00000001854 ortholog_one2one 1 retrogene
retro_nleu_2502,
Otolemur garnettii ENSOGAG00000002603 ortholog_one2one 1 retrogene
retro_ogar_2962,
Pongo abelii ENSPPYG00000019300 ortholog_one2one 1 retrogene
retro_pabe_883,
Pan troglodytes ENSPTRG00000021031 ortholog_one2one 1 retrogene
retro_ptro_720,
Rattus norvegicus ENSRNOG00000012156 ortholog_one2one 2 retrogenes
retro_rnor_936, retro_rnor_937,
Sus scrofa ENSSSCG00000005273 ortholog_one2one 1 retrogene
retro_sscr_979,
Tursiops truncatus ENSTTRG00000003081 ortholog_one2one 1 retrogene
retro_ttru_492,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1049 70.64 98.60
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Download FASTA sequences of all ENSCPOG00000007226 retrocopies