Parental gene:

PCBD2, ENSEEUG00000007051

Aliases:None
Description:pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 [Source:HGNC Symbol;Acc:24474]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_2411:57051..88758(+)


>ENSEEUG00000007051
GCGGCTGCTATAGGGGCTCGGGGGGCGGCGCTGTGCTTGCTCCGGGCGCTGCGGGGTCGCAGCCCGAGCTTCGCAGCCAT
GTCAACAGATGCTCACTGGTTGACTGCAGAGGAGAGGAACCAAGTTATACTTGACCTTACGGCAGCAGGTTGGTTGGAAT
TAAGTGATAGAGATGCTGTCTACAAAGAGTTCATCTTTAAAAATTTTAATCAGGCATTTGGCTTTATGTCCAGAGTTGCT
CTACAAGCAGAGAAGATGAATCATCACCCTTGGTTTAATGTGTACAACAAGGTCCAGATAACTCTTACCTCACATGACTG
TGGTGGACTGACCAAAAGAGATGTGAAATTGGCCAATTTTATTGAAAAAGCAGCTGCCTCTATGTGA

Library Parental gene expression (RPM)
SRP017611_liver 9 .32 RPM
SRP017611_kidney 21 .57 RPM
SRP017611_brain 3 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000019125 ortholog_one2one 2 retrogenes
retro_dnov_645, retro_dnov_660,
Equus caballus ENSECAG00000015810 ortholog_one2one 2 retrogenes
retro_ecab_489, retro_ecab_871,
Echinops telfairi ENSETEG00000016658 ortholog_one2one 2 retrogenes
retro_etel_1252, retro_etel_75,
Macropus eugenii ENSMEUG00000003784 ortholog_one2one 1 retrogene
retro_meug_1185,
Myotis lucifugus ENSMLUG00000012638 ortholog_one2one 1 retrogene
retro_mluc_1445,
Monodelphis domestica ENSMODG00000014351 ortholog_one2one 1 retrogene
retro_mdom_1369,
Pteropus vampyrus ENSPVAG00000000384 ortholog_one2one 2 retrogenes
retro_pvam_63, retro_pvam_750,
Tursiops truncatus ENSTTRG00000016874 ortholog_one2one 3 retrogenes
retro_ttru_1135, retro_ttru_359, retro_ttru_511,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_190 93.39 93.75
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Download FASTA sequences of all ENSEEUG00000007051 retrocopies