Parental gene:

PCBD2, ENSECAG00000015810

Aliases:None
Description:pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 [Source:HGNC Symbol;Acc:24474]
Organism:Horse (Equus caballus)
Coordinates:14:40974553..41018296(-)


>ENSECAG00000015810
TCAGCAGACGCTCACCGGTTGACAGCAGAGGAGAGGACCCAAGTTATACTTGATCTTAAAGCAGCAGGATGGTCGGAATT
AAGTGAGAGAGACGCCATCTACAAAGAGTTTTCCTTCAAAAATTTTAATCAGGCGTTTGGCTTTATGTCCCGAGTTGCTC
TACAAGCAGAGAAGATGAATCATCACCCAGAATGGTTCAATGTGTACAACAAGGTCCAGATAACTCTCACCTCGCATGAC
TGTGGTGGACTGACCAAAAGAGATGTGAAACTGGCCAAGTTTATTGAAAAAGCAGCTGCTTCTGTGTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 3 .24 RPM
SRP021940_embryo 3 .73 RPM
SRP021940_cerebellum 2 .34 RPM
SRP021940_testis 4 .73 RPM
SRP021940_placental_villous 2 .84 RPM
SRP021940_articular_cartilage 1 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000019125 ortholog_one2one 2 retrogenes
retro_dnov_645, retro_dnov_660,
Erinaceus europaeus ENSEEUG00000007051 ortholog_one2one 1 retrogene
retro_eeur_190,
Echinops telfairi ENSETEG00000016658 ortholog_one2one 2 retrogenes
retro_etel_1252, retro_etel_75,
Macropus eugenii ENSMEUG00000003784 ortholog_one2one 1 retrogene
retro_meug_1185,
Myotis lucifugus ENSMLUG00000012638 ortholog_one2one 1 retrogene
retro_mluc_1445,
Monodelphis domestica ENSMODG00000014351 ortholog_one2one 1 retrogene
retro_mdom_1369,
Pteropus vampyrus ENSPVAG00000000384 ortholog_one2one 2 retrogenes
retro_pvam_63, retro_pvam_750,
Tursiops truncatus ENSTTRG00000016874 ortholog_one2one 3 retrogenes
retro_ttru_1135, retro_ttru_359, retro_ttru_511,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_489 71.23 71.57
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2. retro_ecab_871 69.23 100.00
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Download FASTA sequences of all ENSECAG00000015810 retrocopies