Parental gene:

RALA, ENSDNOG00000017413

Aliases:None
Description:v-ral simian leukemia viral oncogene homolog A (ras related) [Source:HGNC Symbol;Acc:9839]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_64:37027..135911(+)


>ENSDNOG00000017413
ATGGCTGCAAATAAACCCAAGGGTCAGAATTCTTTGGCCTTACACAAAGTCATCATGGTGGGCAGTGGTGGTGTGGGGAA
GTCTGCCCTGACTCTCCAGTTCATGTATGATGAGTTTGTGGAGGACTATGAGCCTACCAAAGCAGACAGCTATCGGAAGA
AGGTAGTGCTGGATGGAGAGGAAGTCCAGATTGATATCTTAGATACCGCTGGGCAGGAGGACTATGCTGCAATTAGAGAC
AACTACTTTCGAAGTGGGGAGGGTTTCCTCTGTGTGTTCTCTATTACAGAAATGGAATCCTTTGCAGCCACAGCTGACTT
CAGGGAACAGATTTTAAGAGTAAAAGAAGATGAAAATGTTCCATTTCTGCTGGTTGGTAACAAATCAGATTTAGAAGATA
AAAGGCAGGTTTCTGTAGAAGAGGCAAAAAACAGAGCCGATCAGTGGAATGTTAACTATGTGGAAACATCTGCTAAAACA
CGAGCTAATGTTGACAAGGTCTTTTTTGATTTAATGAGGGAAATTCGAGCCAGAAAGATGGAAGACAGCAAGGAAAAGAA
TGGAAAAAAGAAGAGGAAAAGTTTAGCCAAGAGAATCAGAGAAAGATGCTGCATTTTATAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 8 .17 RPM
SRP012922_cerebellum 6 .05 RPM
SRP012922_heart 2 .78 RPM
SRP012922_kidney 7 .39 RPM
SRP012922_liver 3 .41 RPM
SRP012922_lung 7 .64 RPM
SRP012922_quadricep_muscle 3 .29 RPM
SRP012922_spleen 8 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007630 ortholog_one2one 1 retrogene
retro_cjac_3313,
Dasypus novemcinctus ENSDNOG00000007809 other_paralog 5 retrogenes
retro_dnov_101, retro_dnov_1617, retro_dnov_1764, retro_dnov_628, retro_dnov_94,
Dasypus novemcinctus ENSDNOG00000015293 within_species_paralog 3 retrogenes
retro_dnov_1358, retro_dnov_154, retro_dnov_2354,
Dasypus novemcinctus ENSDNOG00000019724 other_paralog 18 retrogenes
retro_dnov_1243, retro_dnov_1249, retro_dnov_1323, retro_dnov_1395, retro_dnov_1574, retro_dnov_1710, retro_dnov_1763, retro_dnov_1841, retro_dnov_186, retro_dnov_1976, retro_dnov_2033, retro_dnov_217, retro_dnov_2679, retro_dnov_298, retro_dnov_318, retro_dnov_719, retro_dnov_761, retro_dnov_84,
Homo sapiens ENSG00000006451 ortholog_one2one 2 retrogenes
retro_hsap_1136, retro_hsap_3707,
Macropus eugenii ENSMEUG00000000259 ortholog_one2one 1 retrogene
retro_meug_1638,
Macaca mulatta ENSMMUG00000016059 ortholog_one2one 2 retrogenes
retro_mmul_1706, retro_mmul_882,
Nomascus leucogenys ENSNLEG00000003055 ortholog_one2one 1 retrogene
retro_nleu_935,
Pongo abelii ENSPPYG00000017619 ortholog_one2one 3 retrogenes
retro_pabe_3148, retro_pabe_3208, retro_pabe_945,
Pan troglodytes ENSPTRG00000019108 ortholog_one2one 1 retrogene
retro_ptro_2511,
Sus scrofa ENSSSCG00000029741 ortholog_one2one 1 retrogene
retro_sscr_634,
Ictidomys tridecemlineatus ENSSTOG00000020292 ortholog_one2one 2 retrogenes
retro_itri_1314, retro_itri_1315,
Vicugna pacos ENSVPAG00000002810 ortholog_one2one 1 retrogene
retro_vpac_211,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_573 98.54 100.00
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Download FASTA sequences of all ENSDNOG00000017413 retrocopies