Parental gene:

RALA, ENSCJAG00000007630

Aliases:None
Description:v-ral simian leukemia viral oncogene homolog A (ras related) [Source:HGNC Symbol;Acc:9839]
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:7403279..7486298(+)


>ENSCJAG00000007630
ATGGCTGCAAATAAGCCCAAGGGTCAGAATTCTTTGGCCTTACACAAAGTCATCATGGTGGGCAGTGGTGGTGTGGGCAA
GTCAGCTCTGACTCTGCAGTTCATGTACGATGAGTTTGTGGAGGACTATGAGCCTACCAAAGCAGACAGCTACCGGAAGA
AGGTAGTGCTGGATGGGGAGGAAGTACAGATCGATATCTTAGATACAGCTGGGCAGGAGGACTATGCAGCAATTAGAGAC
AACTACTTCCGAAGCGGGGAGGGGTTCCTCTGTGTCTTCTCTATTACAGAAATGGAATCCTTTGCAGCTACAGCTGACTT
CAGGGAGCAGATTTTAAGAGTAAAAGAAGATGAGAATGTTCCATTTCTACTGGTTGGTAACAAATCAGATTTAGAAGATA
AAAGGCAGGTTTCTGTAGAAGAGGCAAAAAACAGAGCTGACCAGTGGAATGTTAACTACGTGGAAACGTCTGCTAAAACA
CGAGCTAATGTTGACAAGGTATTTTTTGACTTAATGAGAGAAATTCGAGCAAGAAAGATGGAAGACAGCAAAGAAAAGAA
TGGAAAAAAGAAGAGGAAAAGTTTAGCCAAGAGAATCAGAGAAAGATGCTGCATTTTATAA

Library Parental gene expression (RPM)
SRP051959_spleen 14 .66 RPM
SRP051959_skeletal_muscle 8 .10 RPM
SRP051959_lymph_node 18 .61 RPM
SRP051959_lung 28 .97 RPM
SRP051959_liver 12 .00 RPM
SRP051959_kidney 13 .31 RPM
SRP051959_heart 14 .15 RPM
SRP051959_colon 17 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007261 other_paralog 3 retrogenes
retro_cjac_1435, retro_cjac_2371, retro_cjac_607,
Callithrix jacchus ENSCJAG00000013392 other_paralog 7 retrogenes
retro_cjac_1671, retro_cjac_2218, retro_cjac_3376, retro_cjac_3707, retro_cjac_3843, retro_cjac_3844, retro_cjac_728,
Callithrix jacchus ENSCJAG00000036517 within_species_paralog 1 retrogene
retro_cjac_2400,
Dasypus novemcinctus ENSDNOG00000017413 ortholog_one2one 1 retrogene
retro_dnov_573,
Homo sapiens ENSG00000006451 ortholog_one2one 2 retrogenes
retro_hsap_1136, retro_hsap_3707,
Macropus eugenii ENSMEUG00000000259 ortholog_one2one 1 retrogene
retro_meug_1638,
Macaca mulatta ENSMMUG00000016059 ortholog_one2one 2 retrogenes
retro_mmul_1706, retro_mmul_882,
Nomascus leucogenys ENSNLEG00000003055 ortholog_one2one 1 retrogene
retro_nleu_935,
Pongo abelii ENSPPYG00000017619 ortholog_one2one 3 retrogenes
retro_pabe_3148, retro_pabe_3208, retro_pabe_945,
Pan troglodytes ENSPTRG00000019108 ortholog_one2one 1 retrogene
retro_ptro_2511,
Sus scrofa ENSSSCG00000029741 ortholog_one2one 1 retrogene
retro_sscr_634,
Ictidomys tridecemlineatus ENSSTOG00000020292 ortholog_one2one 2 retrogenes
retro_itri_1314, retro_itri_1315,
Vicugna pacos ENSVPAG00000002810 ortholog_one2one 1 retrogene
retro_vpac_211,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3313 75.41 59.22
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Download FASTA sequences of all ENSCJAG00000007630 retrocopies