Parental gene:

PSMD10, ENSDNOG00000001902

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 [Source:HGNC Symbol;Acc:9555]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1239:106346..113475(-)


>ENSDNOG00000001902
GAGGGGTGTGTGTCTAACCTAATGGTCTGCAATCTGGCTTACAGTAAGCTGCAGGAGTTGAAGGAGAAGATCCTGGCCGA
TAAATCCCTGGCTACTAGAACTGACCAGGACAGCAGAACTGCTTTGCATTGGGCATGTTCAGCAGGACATACAGAAATTG
TTGAATTCTTACTGCAACTTGGAGTGCCAGTGAATGATAAAGATGATGCAGGCTGGTCTCCTCTTCATATTGCTGCTTCT
GCTGGCCGGGATGAGATTGTAAAAGCCCTTCTGGGAAAAGGTGCTCAAGTGAATGCTGTCAATCAAAATGGCTGTACTCC
CCTGCATTATGCAGCTTCCAAAAACAGGCATGAGATTGCTGTTATGTTATTAGAAGGTGGGGCTAATCCAGATGCTAAGG
ACCATTTTGAGGCTACAGCAATGCACCGGGCAGCAGCCAAGGGTAACTTGAAGATGATTCATATCCTTCTGTACTACAAA
GCATCCACAAACATCCAAGATACTGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAGGAGAGAGTAGAAGAAGCAAA
ACTGCTGGTGTCCCAAGGAGCAAGCATTTACATTGAGAATAAAGAAGAAAAGACACCCCTGCAAGTAGCCAAAGGTGGCT
TAAGTTTAATACTCAAGAGAATGGTGGAAGGTTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 10 .11 RPM
SRP012922_cerebellum 20 .90 RPM
SRP012922_heart 3 .94 RPM
SRP012922_kidney 13 .69 RPM
SRP012922_liver 3 .72 RPM
SRP012922_lung 11 .00 RPM
SRP012922_quadricep_muscle 4 .33 RPM
SRP012922_spleen 9 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012006 ortholog_one2one 1 retrogene
retro_acar_134,
Callithrix jacchus ENSCJAG00000007717 ortholog_one2many 1 retrogene
retro_cjac_2515,
Cavia porcellus ENSCPOG00000015068 ortholog_one2many 1 retrogene
retro_cpor_358,
Homo sapiens ENSG00000101843 ortholog_one2one 3 retrogenes
retro_hsap_1214, retro_hsap_2435, retro_hsap_2737,
Gorilla gorilla ENSGGOG00000002969 ortholog_one2one 3 retrogenes
retro_ggor_1515, retro_ggor_1906, retro_ggor_945,
Microcebus murinus ENSMICG00000002059 ortholog_one2one 1 retrogene
retro_mmur_550,
Myotis lucifugus ENSMLUG00000014534 ortholog_one2one 1 retrogene
retro_mluc_2008,
Macaca mulatta ENSMMUG00000016981 ortholog_one2many 1 retrogene
retro_mmul_1290,
Nomascus leucogenys ENSNLEG00000014001 ortholog_one2one 2 retrogenes
retro_nleu_243, retro_nleu_690,
Oryctolagus cuniculus ENSOCUG00000010837 ortholog_one2many 1 retrogene
retro_ocun_793,
Otolemur garnettii ENSOGAG00000006419 ortholog_one2many 1 retrogene
retro_ogar_213,
Procavia capensis ENSPCAG00000005221 ortholog_one2one 1 retrogene
retro_pcap_461,
Pongo abelii ENSPPYG00000020618 ortholog_one2one 3 retrogenes
retro_pabe_1010, retro_pabe_1793, retro_pabe_2275,
Pan troglodytes ENSPTRG00000022169 ortholog_one2one 3 retrogenes
retro_ptro_1407, retro_ptro_1851, retro_ptro_831,
Ictidomys tridecemlineatus ENSSTOG00000003783 ortholog_one2one 3 retrogenes
retro_itri_1684, retro_itri_312, retro_itri_676,
Tarsius syrichta ENSTSYG00000009920 ortholog_one2one 13 retrogenes
retro_tsyr_1160, retro_tsyr_1674, retro_tsyr_1684, retro_tsyr_1741, retro_tsyr_1830, retro_tsyr_1968, retro_tsyr_1989, retro_tsyr_2010, retro_tsyr_2138, retro_tsyr_2151, retro_tsyr_2167, retro_tsyr_674, retro_tsyr_803,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_208 77.47 79.91
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_dnov_705 81.78 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_dnov_824 77.35 79.91
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_dnov_835 80.54 66.07
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_dnov_1194 80.22 79.91
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000001902 retrocopies