Parental gene:

ENSCJAG00000007717

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:96726510..96733937(-)


>ENSCJAG00000007717
ATGGAGGGGTGTGTGTCTAACCTAATGGTCTGCAACCTGGCCTACAGCGGGAAGCTGGAAGAGTTGAAGGAGAGTATTCA
GGCCGATAAATCCCTGGCTACTAGAACTGACCAGGACAGCAGAACTGCATTGCACTGGGCTTGCTCAGCTGGACACACAG
AAATTGTTGAATTTTTGTTGCAACTTGGAGTGCCAGTGAATGATAAAGATGATGCAGGTTGGTCTCCTCTTCATATTGCG
GCTTCTGCTGGCCGGGATGAGATTGTAAAAGCCCTTCTGGGAAAAGGTGCTCAAGTGAATGCTGTCAATCAAAATGGCTG
TACTCCCCTACATTATGCAGCTTCCAAAAACAGGCATGAGATTGCTGTCATGTTACTAGAAGGTGGGGCTAATCCAGATG
CTAAGGACCATTATGAGGCTACAGCAATGCACCGGGCAGCAGCCAAGGGTAACTTGAAGATGATTCATATCCTTCTGTAC
TACAAAGCATCCACAAATATCCAAGACACTGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAGGAGAGAGTGGAAGA
AGCAAAACTGCTGGTTTCCCAAGGAGCAAGTATTTACATTGAGAATAAAGAAGAAAAGACACCCCTGCAAGTGGCCAAAG
GTAGCCTGGATTTAATACTCAAGAAAATGGTAGAAGGTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 12 .12 RPM
SRP051959_skeletal_muscle 4 .32 RPM
SRP051959_lymph_node 9 .13 RPM
SRP051959_lung 11 .35 RPM
SRP051959_liver 7 .86 RPM
SRP051959_kidney 15 .89 RPM
SRP051959_heart 7 .91 RPM
SRP051959_colon 10 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012006 ortholog_one2many 1 retrogene
retro_acar_134,
Cavia porcellus ENSCPOG00000015068 possible_ortholog 1 retrogene
retro_cpor_358,
Dasypus novemcinctus ENSDNOG00000001902 ortholog_one2many 5 retrogenes
retro_dnov_1194, retro_dnov_208, retro_dnov_705, retro_dnov_824, retro_dnov_835,
Homo sapiens ENSG00000101843 ortholog_one2many 3 retrogenes
retro_hsap_1214, retro_hsap_2435, retro_hsap_2737,
Gorilla gorilla ENSGGOG00000002969 ortholog_one2many 3 retrogenes
retro_ggor_1515, retro_ggor_1906, retro_ggor_945,
Microcebus murinus ENSMICG00000002059 possible_ortholog 1 retrogene
retro_mmur_550,
Myotis lucifugus ENSMLUG00000014534 possible_ortholog 1 retrogene
retro_mluc_2008,
Macaca mulatta ENSMMUG00000016981 possible_ortholog 1 retrogene
retro_mmul_1290,
Nomascus leucogenys ENSNLEG00000014001 ortholog_one2many 2 retrogenes
retro_nleu_243, retro_nleu_690,
Oryctolagus cuniculus ENSOCUG00000010837 ortholog_many2many 1 retrogene
retro_ocun_793,
Otolemur garnettii ENSOGAG00000006419 ortholog_many2many 1 retrogene
retro_ogar_213,
Procavia capensis ENSPCAG00000005221 ortholog_one2many 1 retrogene
retro_pcap_461,
Pongo abelii ENSPPYG00000020618 ortholog_one2many 3 retrogenes
retro_pabe_1010, retro_pabe_1793, retro_pabe_2275,
Pan troglodytes ENSPTRG00000022169 ortholog_one2many 3 retrogenes
retro_ptro_1407, retro_ptro_1851, retro_ptro_831,
Ictidomys tridecemlineatus ENSSTOG00000003783 ortholog_one2many 3 retrogenes
retro_itri_1684, retro_itri_312, retro_itri_676,
Tarsius syrichta ENSTSYG00000009920 ortholog_one2many 13 retrogenes
retro_tsyr_1160, retro_tsyr_1674, retro_tsyr_1684, retro_tsyr_1741, retro_tsyr_1830, retro_tsyr_1968, retro_tsyr_1989, retro_tsyr_2010, retro_tsyr_2138, retro_tsyr_2151, retro_tsyr_2167, retro_tsyr_674, retro_tsyr_803,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2515 77.72 80.97
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000007717 retrocopies