Parental gene:

MPC2, ENSCPOG00000003860

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_39:4996940..5013666(-)


>ENSCPOG00000003860
ATGTCAGCCGCCGGCGCCCGGGGCCTGCGGGCCTTGCACCACCGGCTCCTCGATAGAGTGGAGCTGATGCTGCCGGAGAA
ACTGAGGCCGCTGTACAACCACCCGGCAGGCCCCAGAACAGTGTTTTTCTGGGCTCCAATTATGAAATGGGGCTTGGTGT
GTGCTGGGTTGGCGGACATGGCCAGGCCTGCAGAGAAGCTCAGCACTGCTCAGTCCACCGTTCTGATGGCTACAGGATTT
ATTTGGTCAAGATACTCACTTGTAATTATACCAAAAAATTGGAGTCTGTTTGCTGTTAATTTTTTTGTGGGAGCTGCAGG
AGCCTCTCAGCTCTTTCGTATTTGGAGATACAACCAAGAACTGAAAGCTAAAGCAGTC

Library Parental gene expression (RPM)
SRP017611_liver 50 .93 RPM
SRP017611_kidney 48 .68 RPM
SRP017611_brain 18 .23 RPM
SRP040447_lung 17 .96 RPM
SRP040447_skeletal_muscle 89 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006273 ortholog_one2one 2 retrogenes
retro_amel_527, retro_amel_987,
Bos taurus ENSBTAG00000020968 ortholog_one2one 2 retrogenes
retro_btau_1459, retro_btau_557,
Canis familiaris ENSCAFG00000015358 ortholog_one2one 2 retrogenes
retro_cfam_1350, retro_cfam_1897,
Choloepus hoffmanni ENSCHOG00000007752 ortholog_one2many 6 retrogenes
retro_chof_1286, retro_chof_1294, retro_chof_2021, retro_chof_23, retro_chof_47, retro_chof_835,
Callithrix jacchus ENSCJAG00000016985 ortholog_one2one 1 retrogene
retro_cjac_4207,
Dasypus novemcinctus ENSDNOG00000011180 ortholog_one2one 1 retrogene
retro_dnov_475,
Microcebus murinus ENSMICG00000011691 ortholog_one2one 5 retrogenes
retro_mmur_1158, retro_mmur_1503, retro_mmur_317, retro_mmur_348, retro_mmur_986,
Myotis lucifugus ENSMLUG00000011873 ortholog_one2one 1 retrogene
retro_mluc_610,
Macaca mulatta ENSMMUG00000010387 ortholog_one2one 1 retrogene
retro_mmul_432,
Mus musculus ENSMUSG00000026568 ortholog_one2one 3 retrogenes
retro_mmus_1651, retro_mmus_578, retro_mmus_647,
Otolemur garnettii ENSOGAG00000003130 ortholog_one2one 3 retrogenes
retro_ogar_1494, retro_ogar_1992, retro_ogar_2653,
Sus scrofa ENSSSCG00000006304 ortholog_one2one 1 retrogene
retro_sscr_241,
Tupaia belangeri ENSTBEG00000014189 ortholog_one2one 9 retrogenes
retro_tbel_1099, retro_tbel_1446, retro_tbel_1614, retro_tbel_1847, retro_tbel_2174, retro_tbel_3168, retro_tbel_433, retro_tbel_4444, retro_tbel_734,
Tarsius syrichta ENSTSYG00000010251 ortholog_one2many 3 retrogenes
retro_tsyr_10, retro_tsyr_141, retro_tsyr_1810,
Tursiops truncatus ENSTTRG00000008566 ortholog_one2one 1 retrogene
retro_ttru_1743,
Vicugna pacos ENSVPAG00000010556 ortholog_one2one 1 retrogene
retro_vpac_51,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_494 80.00 55.56
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Download FASTA sequences of all ENSCPOG00000003860 retrocopies