Parental gene:

RPL18, ENSCHOG00000009140

Aliases:None
Description:ribosomal protein L18 [Source:HGNC Symbol;Acc:10310]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_495:23..3065(-)


>ENSCHOG00000009140
ATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCTGTACAGGTTTCTGGCTAGACGAACCAACTCTACCTTCAACCAAGTTGTCCTAAAGCGGTTGTTCATGA
GTCGCACCAACCGGCCACCCCTGTCCCTTTCTCGGATGATCCGGAAGATGAAGCTTCCTGGCCGTGAGAACAAAACAGCT
GTGGTTGTAGGGACCATAACAGATGATGTGCGCATTCAGGAGGTGCCCAAACTGAAGGTGTGTGCGCTGCGCGTGACCAG
CCGTGCCCGGAGCCGCATCCTCAAGGCTGGAGGCAAGATCCTCACCTTCGATCAGCTGGCCCTGGACTCCCCCAAGGGTT
GTGGCACCGTGCTGCTCTCTGGTCCCCGCAAGGGCCGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014872 ortholog_one2one 3 retrogenes
Bos taurus ENSBTAG00000015388 ortholog_one2one 1 retrogene
Canis familiaris ENSCAFG00000003967 ortholog_one2one 7 retrogenes
Callithrix jacchus ENSCJAG00000000377 ortholog_one2one 4 retrogenes
Equus caballus ENSECAG00000021927 ortholog_one2one 3 retrogenes
Erinaceus europaeus ENSEEUG00000015872 ortholog_one2one 5 retrogenes
Echinops telfairi ENSETEG00000013157 ortholog_one2one 6 retrogenes
Felis catus ENSFCAG00000008652 ortholog_one2many 4 retrogenes
Homo sapiens ENSG00000063177 ortholog_one2one 11 retrogenes
Gorilla gorilla ENSGGOG00000024878 ortholog_one2many 7 retrogenes
Loxodonta africana ENSLAFG00000031267 ortholog_one2one 1 retrogene
Macropus eugenii ENSMEUG00000000640 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000009286 ortholog_one2one 12 retrogenes
Macaca mulatta ENSMMUG00000022158 ortholog_one2many 3 retrogenes
Monodelphis domestica ENSMODG00000014099 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000003891 ortholog_one2many 4 retrogenes
Nomascus leucogenys ENSNLEG00000004537 ortholog_one2many 11 retrogenes
Otolemur garnettii ENSOGAG00000003562 possible_ortholog 16 retrogenes
Oreochromis niloticus ENSONIG00000006539 ortholog_one2one 1 retrogene
Pongo abelii ENSPPYG00000010206 ortholog_one2one 6 retrogenes
Pan troglodytes ENSPTRG00000011245 ortholog_one2one 10 retrogenes
Pteropus vampyrus ENSPVAG00000009524 ortholog_one2one 10 retrogenes
Rattus norvegicus ENSRNOG00000021035 possible_ortholog 14 retrogenes
Sarcophilus harrisii ENSSHAG00000006564 ortholog_one2one 2 retrogenes
Sus scrofa ENSSSCG00000025928 ortholog_one2many 5 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000012258 possible_ortholog 5 retrogenes
Tupaia belangeri ENSTBEG00000001594 ortholog_one2one 18 retrogenes
Tursiops truncatus ENSTTRG00000008187 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_427 77.39 78.77
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_chof_436 60.71 57.53
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_chof_1408 74.31 74.66
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_chof_1668 64.84 60.96
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_chof_1697 57.52 76.03
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_chof_2025 86.11 73.29
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSCHOG00000009140 retrocopies