Parental gene:

FAM122B, ENSCAFG00000018882

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:X:105394412..105415532(-)


>ENSCAFG00000018882
ATGGCTCAGGAGAAAATGGAGCTGGACTTCGAGCCTGACACATCCGATGGGGGCACCCTGAGGAGATCCAGCAGCGCTCC
CCTGATCCATGGGCTCAGTGATCTTTCACAGGTCTTTCAACCTTATACATTTAGAACTCGGAGGAATAGTACAACAGTTA
TGAGCCGTCATAACCTGTTGCTGTCATCCTCCCCTAATCGTGTTCCTAGTAGCCGACTGCATCAGATCAAAAGGGAGGAA
GGCATGGATATGATGAACAGGGAAACAGCACACGAACGGGAAGTGCAGACAGCAATGCAGATAAGCCAATCATGGGATGA
GAGCTTGAGCTTGAGTGACAGCGATTTTGAGAAGCCGGAGAAACTATATTCTCCTAAAAGGATTGACTTCACTCCAGTTT
CTCCGGCACCGTCACCCACCAGAGGATTTGGAAAGCAATGTTTTTCACCATCCTTACAAATGTTTGTGAGCAGCAGTGGG
CTGCCACCAAGTCCTGTTCCTAGTCCCAGACGCTTTGCCAACAAGAGGAGTCAGAGTCCAGTCAAATGTATCAGGCCCAG
TGTTCTTGGTCCCCTGAAAAGAAAAGGTGAAATGGAGACGGAAAGCCAGCCCAAGAGGCTCTTCCAAGGCACTACCAGTA
TGCTGTCTCCGGAGGCTGCTCAACTGTCTGATCTCAGTTCATGCTTTGTCCTCAGTTCAGATATTTTGGATGGCAGTAGT
AGCAGCAGTGGCTTATCCTCAGACTCACTGGCTAAAGGCAGCACAACCGCAGAGTCTCCAGTAGCATGCTCCAATTCATG
CTCTCCGTTCATCTTGATGGATGATCTCTCACCCAAAATAATAGAT

Library Parental gene expression (RPM)
SRP017611_brain 28 .18 RPM
SRP017611_kidney 10 .37 RPM
SRP017611_liver 3 .99 RPM
SRP012049_cerebellum 23 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001311 ortholog_one2one 1 retrogene
retro_amel_105,
Bos taurus ENSBTAG00000001886 ortholog_one2one 1 retrogene
retro_btau_103,
Callithrix jacchus ENSCJAG00000004313 ortholog_one2one 1 retrogene
retro_cjac_594,
Cavia porcellus ENSCPOG00000011218 ortholog_one2one 1 retrogene
retro_cpor_80,
Equus caballus ENSECAG00000018643 ortholog_one2one 1 retrogene
retro_ecab_91,
Felis catus ENSFCAG00000024842 ortholog_one2one 1 retrogene
retro_fcat_1575,
Myotis lucifugus ENSMLUG00000007988 ortholog_one2one 1 retrogene
retro_mluc_382,
Macaca mulatta ENSMMUG00000016948 ortholog_one2one 1 retrogene
retro_mmul_185,
Mustela putorius furo ENSMPUG00000012690 ortholog_one2one 1 retrogene
retro_mputfur_64,
Mus musculus ENSMUSG00000036022 ortholog_one2one 1 retrogene
retro_mmus_22,
Rattus norvegicus ENSRNOG00000050146 ortholog_one2many 1 retrogene
retro_rnor_651,
Sus scrofa ENSSSCG00000012685 ortholog_one2one 1 retrogene
retro_sscr_60,
Ictidomys tridecemlineatus ENSSTOG00000006261 ortholog_one2one 1 retrogene
retro_itri_61,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_181 69.70 93.26
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Download FASTA sequences of all ENSCAFG00000018882 retrocopies