Parental gene:

SEPW1, ENSCAFG00000004074

Aliases:None
Description:Canis lupus familiaris selenoprotein W, 1 (SEPW1), mRNA. [Source:RefSeq mRNA;Acc:NM_001115012]
Organism:Dog (Canis familiaris)
Coordinates:1:108285442..108289551(-)


>ENSCAFG00000004074
ATGGCCCTCGCCGTCCGAGTCGTCTACTGGAATGCAGACAGCTACAAGTCCAAGTACCTTCAGCTCAAGAAGAAGTTAGA
GGATGAGTTCCCCGGATGCCTGGACATCTGTGGCGAGGGGACTCCCCAGGCCACCGGCTTCTTTGAAGTGACGGTAGCGG
GGAAGTTGGTTCACTCCAAGAAGAGAGGTGATGGCTACGTGGACACGGAGAGCAAGTTTCTGAGGCTGGTGGCCGCCATC
AAAACCGCTTTGGCTCAGGGCTAA

Library Parental gene expression (RPM)
SRP017611_brain 203 .01 RPM
SRP017611_kidney 79 .44 RPM
SRP017611_liver 26 .10 RPM
SRP012049_cerebellum 153 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015208 ortholog_one2one 1 retrogene
retro_amel_1135,
Bos taurus ENSBTAG00000008203 ortholog_one2one 2 retrogenes
retro_btau_1527, retro_btau_756,
Choloepus hoffmanni ENSCHOG00000013206 ortholog_one2many 2 retrogenes
retro_chof_1486, retro_chof_61,
Felis catus ENSFCAG00000015176 ortholog_one2many 2 retrogenes
retro_fcat_108, retro_fcat_186,
Mustela putorius furo ENSMPUG00000004433 ortholog_one2one 1 retrogene
retro_mputfur_326,
Rattus norvegicus ENSRNOG00000013548 ortholog_one2one 2 retrogenes
retro_rnor_1819, retro_rnor_688,
Ictidomys tridecemlineatus ENSSTOG00000001294 ortholog_one2one 1 retrogene
retro_itri_578,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1368 71.64 91.78
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000004074 retrocopies