Parental gene:

UBQLN1, ENSTTRG00000004696

Aliases:None
Description:ubiquilin 1 [Source:HGNC Symbol;Acc:12508]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_2718:435093..486998(-)


>ENSTTRG00000004696
ATGGCCGAGAATGGTGAAAGCGGCGGCCCTCCGAGCTCCCAGGACAGCGCCGCCGCTGCCGAAGGTGCCGGCGCCCCCGC
CGCCGCCGCTGCTGCTGCCTCCACGGAACCCAAGATCATGAAAGTCACCGTGAAGACCCCGAAGGAGAAGGAGGAGTTCG
CAGTGCCCGAGAATAGCTCCGTCCAGCAGTTCAAGGAAGAAATCTCTAAACGTTTTAAATCCCATACCGACCAACTTGTG
TTGATATTTGCTGGAAAAATTTTAAAAGATCAAGATACTTTGAGTCAGCATGGAATTCACGATGGACTTACTGTTCACCT
TGTCATCAAAACGCAAAACAGGCCTCAGGATCATTCAGCTCAGCAAACAAACACCAGTGGAAGCAATGCTACTGCATCAT
CAGCTCCTAATAGTAACTCCACATCTGGTTCTGCCACTAGCAACCCTTTTGGTTTAGGTGGGCTTGGAGGACTTGCAGGT
CTGAGTAGCTTGGGTTTGAATACTACCAACTTCTCTGAACTACAGAGCCAGATGCAGCGGCAACTTATGTCCAATCCTGA
AATGATGGTCCAGATCATGGAGAATCCCTTTGTCCAGAGCATGCTTTCAAATCCTGACCTGATGAGGCAGTTAATTATGG
CCAATCCACAAATGCAGCAGTTGATACAGAGAAATCCAGAAATTAGTCATATGCTGAATAATCCAGATATTATGAGACAG
ACATTGGAACTTGCTAGGAATCCAGCAATGATGCAGGAAATGATGAGAAACCAGGACCGAGCTTTGAGCAACCTTGAAAG
CATCCCGGGGGGATATAATGCTTTACGGCGCATGTACACAGATATTCAGGAACCAATGCTGAGTGCTGCACAAGAACAGT
TTGGTGGCAATCCGTTTGCTTCCTTAGTGAGCAATACATCCTCAGGTGAAGGTAGTCAACCTTCCCGTACAGAAAATAGA
GATCCATTACCCAATCCATGGGCTCCACAGGCTTCCCAGAGTTCATCAGCTTCCAGTGGCACCACCAGTGCCGTGGGGGG
CACTAGTAGTGGTGCTGCCAGTGGCACTGCCGGGCAGAGTTCTACTGTGCCAAATTTGGGGCCTGGAGTAGGAGCTAGTA
TGTTCAACACACCAGGAATGCAGAGCTTGTTGCAACAAATAACTGAAAACCCACAACTTATGCAAAACATGTTGTCTGCC
CCCTACATGAGAAGCATGATGCAGTCACTAAGCCAGAACCCTGACCTTGCTGCACAGATGATGCTGAATAATCCCCTATT
TGCTGGAAATCCTCAGCTTCAAGAACAAATGAGACAACAGCTCCCAACTTTCCTCCAACAAATGCAGAATCCTGATACGT
TATCAGCAATGTCAAACCCTAGAGCAATGCAGGCCTTGTTACAGATTCAGCAGGGTTTACAGACCTTAGCGACTGAAGCC
CCCGGCCTCATCCCCGGGTTTACTCCTGGCCTGGGGGCATTAGGAAGCACTGGAGGCTCTTCAGGAACCAGTGGCTCTAA
TTCTGCATCTGGTGAAAACCCAAGTCCCACAGCAGGAACCACCGAATCTGGACACCAGCAGTTTATCCAACAAATGCTAC
AGGCTCTTGCTGGAGTGAATCCTCAGNNNNNNNNNNNNNAAGTCAGATTTCAGCAGCAACTAGAACAGCTCAGTGCAATG
GGATTTTTGAACCGTGAAGCAAACTTGCAAGCGCTAATAGCCACAGGAGGTGATATCAATGCGGCTATTGAAAGGTTACT
GGGCTCTCAACCATCATAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014827 ortholog_one2one 2 retrogenes
retro_btau_1087, retro_btau_188,
Canis familiaris ENSCAFG00000001435 ortholog_one2one 1 retrogene
retro_cfam_236,
Callithrix jacchus ENSCJAG00000003609 ortholog_one2one 2 retrogenes
retro_cjac_3977, retro_cjac_4067,
Cavia porcellus ENSCPOG00000004849 ortholog_one2one 1 retrogene
retro_cpor_113,
Dasypus novemcinctus ENSDNOG00000012687 ortholog_one2one 1 retrogene
retro_dnov_14,
Dipodomys ordii ENSDORG00000015266 ortholog_one2one 1 retrogene
retro_dord_680,
Equus caballus ENSECAG00000019110 ortholog_one2one 1 retrogene
retro_ecab_1063,
Echinops telfairi ENSETEG00000002822 ortholog_one2one 1 retrogene
retro_etel_39,
Felis catus ENSFCAG00000015049 ortholog_one2one 1 retrogene
retro_fcat_83,
Homo sapiens ENSG00000135018 ortholog_one2one 1 retrogene
retro_hsap_58,
Myotis lucifugus ENSMLUG00000002036 ortholog_one2many 2 retrogenes
retro_mluc_1774, retro_mluc_33,
Mustela putorius furo ENSMPUG00000002028 ortholog_one2one 1 retrogene
retro_mputfur_55,
Mus musculus ENSMUSG00000005312 ortholog_one2one 1 retrogene
retro_mmus_83,
Nomascus leucogenys ENSNLEG00000003306 ortholog_one2one 1 retrogene
retro_nleu_31,
Otolemur garnettii ENSOGAG00000012947 ortholog_one2one 1 retrogene
retro_ogar_276,
Pongo abelii ENSPPYG00000019323 ortholog_one2one 1 retrogene
retro_pabe_87,
Pan troglodytes ENSPTRG00000021055 ortholog_one2one 1 retrogene
retro_ptro_93,
Rattus norvegicus ENSRNOG00000019282 ortholog_one2one 1 retrogene
retro_rnor_339,
Ictidomys tridecemlineatus ENSSTOG00000013462 ortholog_one2one 1 retrogene
retro_itri_157,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_1475 78.42 81.25
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSTTRG00000004696 retrocopies