Parental gene:

PES1, ENSTBEG00000009825

Aliases:None
Description:pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:8848]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_777:192316..222301(-)


>ENSTBEG00000009825
ATGGAGGCTGTAGAGAGAGTGTATGAACGGGGCTCTGCCACCAACTACATCACCCGAAATAAAGCCCGGAAGAAGCTGCA
GCTGAGCCTGGCTGACTTCAGGCGGCTGTGCATCCTCAAAGGCATTTATCCCCATGAGCCCAAACACAAGAAGAAGGTTA
ACAAGGGTTCCACAGCTGCCCGCACTTTCTACCTTCTCAAAGATATCAAGTTTCTCCTTCATGAACCCATCGTCAACAAG
TTCCGGGAATACAAGGTCTTTGTCCGGAAGCTCCGGAAGGCATATGGGAAGAGCGAGTGGAACACCGTGGAGCGTCTGAA
GGACAATAAGCCTAACTACAAACTTGACCACATCGTCAAGGAGCGGTACCCCACTTTCATCGACGCCCTGCGGGACCTGG
ACGACGCCCTGTCTATGTGCTTCCTCTTCTCCACCTTCCCGCGGACCGGCAAGTGCCACGTGCACACCATCCAGCTGTGC
CGCCGGCTCTCTGTGGAGTTCATGCACTACGTCATTGCTGCCCGGGCCCTGCGCAAGGTCTTCCTGTCCATCAAAGGCAT
TTACTACCAGGTGGAGGTGCTGGGGCAGCCCATCGTGTGGATCACCCCCTACACCTTCTCCCACGACCACCCGACAGATG
TGGACTACAGGGTCATGGCCACCTTCACCGAGTTCTACACCACCCTGCTGGGCTTCGTCAACTTCCGCCTTTACCAGTCA
CTGAACCTCCACTACCCCCCCAAGCTCGAGGGTCAGACCCAAGGAGAGGCAGAGGCCAGTGAGGGGACCTATGCGCTGGA
CACTGAGAGCTCTATGGAGAAACTGGCAGCCCTCAGTGCCAGTCTGGCCCGTGCGGTGGTGCCTGCCACAGAGGAGGAGG
CCGAGGTAGATGAGTTTCCCACCGATGAGGAGATGGCGGCACAGGAGGAGGACCGCAGGAAGGAGCTGGAGGCACAGGAA
AAGCACAAGAAGCTGTTTGAGGGCCTGAAGTTCTTCCTGAACCGCGAGGTGCCGCGCGAGGCCCTGGCCTTCATCATCAG
GAGTTTTGGTGGGGCTGTGTCTTGGGACAAGTCACTGTGCATCGGGGCCACCTATGATGTCACAGACTCCTGCATCACCC
ACCAGATCGTGGACCGGCCTGGGCAGATGACCTCCGTCATTGGCAGGTGCTACGTGCAGCCCCAGTGGGTGTTTGACTCC
GTGAATGCCCGCCTTCTCCTGCCCGTGGCAGAGTACTTCCCTGGGGTACAGCTGCCCCCGCACCTTTCACCCTTCGTGTC
CGAGAAGGAAGGAGATTATGTCCCACCCGAGAAGCTGAAGCTTCTGGCTCTGCAGCGAGGAGAGGACCCAGGAAATTTGT
ATGAATCAGAAGAGGAGGAAGAAGACAATGAAGATGCTGGTGATGAAGGAGAAAACGAGGAGGATGAGGAAGATGAAGCT
GGTTCAGAAAAGGAAGAAGAGGCCCGACTGACAGCCCTGGAAGAGCAGAGGATGGAGGGGAAGAAGCCCAGAGTGATGGC
GGGCACCGTGAAGCTGGAGAACAAGCAGCGGCTGGCCCAGGAGGAGGAGAGTGAGGCCAAGCGCCTGGCCATCATGATGA
TGAAGAAGAGGGAGAAGTACCTGTACAACAAGATCATGTTTGGCAAGAGGCGCAAAGTCCGTGAGGCCAACAAACTAGCA
GAGAAGCGGAAAGCCCACGATGAGGCTGTGAGGGCTGAGAAGAAGGCCAGGAAGGCAAGGCCGGTGTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010617 ortholog_one2one 1 retrogene
retro_cjac_3182,
Cavia porcellus ENSCPOG00000003565 possible_ortholog 1 retrogene
retro_cpor_986,
Homo sapiens ENSG00000100029 ortholog_one2one 1 retrogene
retro_hsap_4133,
Otolemur garnettii ENSOGAG00000005804 ortholog_one2one 1 retrogene
retro_ogar_1719,
Pongo abelii ENSPPYG00000011716 ortholog_one2one 1 retrogene
retro_pabe_3471,
Pan troglodytes ENSPTRG00000014251 ortholog_one2one 2 retrogenes
retro_ptro_2018, retro_ptro_2809,
Rattus norvegicus ENSRNOG00000004515 possible_ortholog 2 retrogenes
retro_rnor_2953, retro_rnor_824,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_1000 90.26 65.12
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Download FASTA sequences of all ENSTBEG00000009825 retrocopies