Parental gene:

PES1, ENSOGAG00000005804

Aliases:None
Description:pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:8848]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873813.1:66009..82761(-)


>ENSOGAG00000005804
ATGGGAGGCCTTGAGAGGAAGAAGTATGAACGAGGCTCTGCCACCAACTACATCACCCGAAATAAAGCCCGGAAGAAGCT
GCAGCTGAGCCTGGCTGACTTCAGGCGGCTGTGCATCCTGAAGGGCATTTATCCCCATGAGCCCAAACACAAGAAGAAGG
TTAACAAGGGCTCCACTGCGGCCCGAACTTTTTACCTTGTCAAAGACATCAAGTTTCTCCTCCATGAACCTATTGTCAAC
AAGTTCCGGGAATACAGTGTGTTTGTTCGGAAGCTCCGGAAGGCCTATGGGAAGAGTGAGTGGAACACTGTGGAGCGTCT
GAAGGACAACAAGCCTAACTATAAACTTGACCACATCATCAAGGAGCGGTACCCCACGTTCATTGACGCTCTGCGGGACC
TGGACGACGCCCTCTCCATGTGCTTCCTCTTTTCCACTTTCCCTCGGACTGGCAAGTGCCACGTGCAGACCATTCAACTG
TGCCGCCGGCTCACTGTGGAGTTCATGCACTACATCATTGCTGCCCGTGCCCTGCGCAAGGTCTTCCTGTCCATCAAAGG
CATCTACTACCAGGCTGAAGTGCTGGGACAGCCTATTGTGTGGATCACACCCTACGCCTTCTCCCATGATCACCCAACAG
ATGTGGACTACAGGGTCATGGCCACCTTCACTGAGTTCTACACCACCTTGCTGGGCTTTGTCAACTTCCGCCTCTACCAG
TCACTCAACCTCCACTACCCACCCAAGCTTGAGGATCAGGTTGAAGCAAAGGTGAAGGACAGTGAGGGCACCTATGCACT
GGACTCCGAAAGCTCTATGGAGAAACTGGCAGCCCTCAGTGCCAGCCTGGCTCGAGTGGTGGTACCTGCCATTGAGGAGG
AGGCCGAGGTGGATGAATTTCCTGCTGATGAGGAGATAGCTGTGCGGGAAGAGGACCACAGAAAGGAACTGGAGGCACAG
GAAAAGCATAAGAAGCTCTTTGAGGACCTGAAGTTCTTCCTGAATCGTGAGGTGCCCCGTGAGGCCCTGGCCTTCATCAT
CAGGAGTTTTGGGGGGGACGTATCCTGGGACAAGTCTGTGTGCATTGGAGCCACCTATGATGTCACAAACTCCTGCATCA
CCCACCAGATTGTCGACCGGCCTGGGCAGCAGACCTCTGTCATTGGCAGCACTTTGTACCAGCCTCAGTGGGTGTTTGAC
TCTGTGAATGCCCGGCTCCTCCTCCCGGTGTCAGAGTACTTCCCTGGTGTGAAGCTGCCCCCACACCTTTCACCCTTCGT
GTCTGAGAAGGAAGGAGATTACATCCCACCTGAGAAACTGAAACTGCTGGCTCTACAGCGGGGAGAGGATCCAGGAAACT
TGAATGAGTCTGAAGAAGAGGAGAAGGAGGAAGACAATGAAGGTGATGGCAATGAAGGGGGAGAAAATGAAGAAGAGGAG
GATGTGGAGACTAGTTCAGAAAAGGAAGAAGAAGCGCGACTGACAGCTCTTGAGGAGCAGAGGATGGAGAAAAAGAAGCC
CCAGGTGATGGAAGGCACCATGAAGCTGGAAGACAAGCAGCGGCTGGCCCAAGAGGAAGAGAGCGAGGCCAAACGCCTGG
CCATCATGATGATGAAGAAGCGAGAGAAGTACCTGTACAACAAGATCATGTTTGGCAAGAGGCGCAAAATTCGCGAGGCC
AACAAGCTGGCAGAGAAGCGGAAAGCCCATGATGAGGCCTTGAGGTCTGAGAAGAAGGCCAAGAAGGCAAAGGTGGTGTG
A

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010617 ortholog_one2one 1 retrogene
retro_cjac_3182,
Cavia porcellus ENSCPOG00000003565 possible_ortholog 1 retrogene
retro_cpor_986,
Homo sapiens ENSG00000100029 ortholog_one2one 1 retrogene
retro_hsap_4133,
Pongo abelii ENSPPYG00000011716 ortholog_one2one 1 retrogene
retro_pabe_3471,
Pan troglodytes ENSPTRG00000014251 ortholog_one2one 2 retrogenes
retro_ptro_2018, retro_ptro_2809,
Rattus norvegicus ENSRNOG00000004515 possible_ortholog 2 retrogenes
retro_rnor_2953, retro_rnor_824,
Tupaia belangeri ENSTBEG00000009825 ortholog_one2one 1 retrogene
retro_tbel_1000,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1719 82.28 83.11
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Download FASTA sequences of all ENSOGAG00000005804 retrocopies