Parental gene:

EEF1G, ENSSTOG00000002851

Aliases:None
Description:eukaryotic translation elongation factor 1 gamma [Source:HGNC Symbol;Acc:3213]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393391.1:680513..691446(+)


>ENSSTOG00000002851
ATGGCGGCTGGGACCCTGTACACATACCCTGAAAACTGGAGGGCCTTCAAGGCCCTCATCGCTGCTCAGTACAGTGGGGC
TCAGGTCCGCGTGCTCTCCGCACCACCCCATTTCCATTTTGGCCAAACCAACCGTACCCCTGAATTTCTCCGCAAATTTC
CTGCTGGCAAGGTTCCAGCATTTGAGGGTGATGATGGATTCTGTGTGTTTGAGAGCAATGCCATCGCCTACTATGTGAGC
AATGAGGAGCTGCGGGGAAGTACTCCAGAGGCAGCAGCCCAGGTGGTGCAGTGGGTGAGCTTTGCTGATAGTGACATAGT
GCCCCCAGCCAGTACCTGGGTGTTCCCTACCTTGGGCATCATGCACCACAACAAACAGGCCACTGAAAATGCAAAAGAGG
AGGTGAGGCGAATTCTGGGACTGCTGGATGCTCACTTGAAGACAAGGACTTTTCTTGTGGGTGAACGAGTGACACTGGCT
GACATCACAGTTGTCTGCACCCTGTTGTGGCTCTATAAACAGGTCTTGGAACCTTCTTTTCGCCAGGCCTTTCCCAATAC
CAATCGCTGGTTCCTTACCTGCATTAACCAGCCCCAGTTCCGGGCTATCTTGGGTGAGGTGAAACTGTGTGAGAAGATGG
CTCAGTTTGATGCTAAGAAGTTTGCAGAGAGCCAGCCTAAAAAAGATACCCCACGGAAAGAAAAGGGTTCCCGAGAAGAG
AAGCAGAAGCCCCAGGCAGAGCGGAAAGAAGAAAAAAAGGCAGCTGCCTCAGCTCCAGAGGAGGAGATGGATGAATGTGA
GCAGGCACTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTTGCTCACCTGCCTAAGAGTACCTTTGTGTTGGATGAATTTA
AACGCAAATACTCCAATGAGGACACGCTCTCTGTGGCCCTGCCATATTTTTGGGATCACTTTGATAAGGATGGTTGGTCC
TTGTGGTACGCTGAATACCGCTTTCCTGAAGAGCTCACCCAGACCTTCATGAGTTGCAACCTCATCACTGGAATGTTTCA
GCGATTGGACAAGCTGAGGAAAAACGCCTTTGCCAGTGTCATCCTCTTTGGAACCAACAATAGCAGCTCCATTTCTGGAG
TCTGGGTCTTCCGAGGCCAGGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTACGAGTCATACACATGGCGG
AAACTAGATCCTGGCAGCGAGGAGACCCAGACCCTGGTTCGAGAGTACTTTTCCTGGGAAGGGGCCTTCCAGCATGTGGG
CAAAGCCTTCAATCAGGGCAAGATCTTCAAGTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015834 possible_ortholog 6 retrogenes
retro_cfam_1241, retro_cfam_1398, retro_cfam_1862, retro_cfam_478, retro_cfam_638, retro_cfam_653,
Erinaceus europaeus ENSEEUG00000001231 ortholog_one2one 1 retrogene
retro_eeur_575,
Homo sapiens ENSG00000254772 ortholog_one2one 4 retrogenes
retro_hsap_2778, retro_hsap_2982, retro_hsap_3906, retro_hsap_4744,
Gorilla gorilla ENSGGOG00000013557 ortholog_one2one 12 retrogenes
retro_ggor_1935, retro_ggor_1936, retro_ggor_1991, retro_ggor_1992, retro_ggor_2064, retro_ggor_2065, retro_ggor_2214, retro_ggor_243, retro_ggor_2542, retro_ggor_2633, retro_ggor_2946, retro_ggor_2947,
Latimeria chalumnae ENSLACG00000014700 ortholog_one2many 1 retrogene
retro_lcha_82,
Loxodonta africana ENSLAFG00000003339 ortholog_one2one 1 retrogene
retro_lafr_381,
Macaca mulatta ENSMMUG00000006598 ortholog_one2one 5 retrogenes
retro_mmul_1447, retro_mmul_1905, retro_mmul_2528, retro_mmul_736, retro_mmul_802,
Monodelphis domestica ENSMODG00000007691 possible_ortholog 1 retrogene
retro_mdom_68,
Mus musculus ENSMUSG00000071644 ortholog_one2one 7 retrogenes
retro_mmus_1447, retro_mmus_1839, retro_mmus_2350, retro_mmus_2765, retro_mmus_3080, retro_mmus_425, retro_mmus_989,
Nomascus leucogenys ENSNLEG00000003528 ortholog_one2many 2 retrogenes
retro_nleu_1510, retro_nleu_681,
Pan troglodytes ENSPTRG00000003768 ortholog_one2many 3 retrogenes
retro_ptro_1879, retro_ptro_2017, retro_ptro_3159,
Rattus norvegicus ENSRNOG00000020075 ortholog_one2one 8 retrogenes
retro_rnor_1312, retro_rnor_2126, retro_rnor_2235, retro_rnor_2269, retro_rnor_2468, retro_rnor_2617, retro_rnor_2928, retro_rnor_979,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_852 87.02 100.00
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2. retro_itri_886 90.07 66.59
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Download FASTA sequences of all ENSSTOG00000002851 retrocopies