Parental gene:

GSTM3, ENSSSCG00000006821

Aliases:None
Description:glutathione S-transferase mu 3 (brain) [Source:HGNC Symbol;Acc:4635]
Organism:Pig (Sus scrofa)
Coordinates:4:120827505..120830538(-)


>ENSSSCG00000006821
GCAAGTGAAGTCACCATGCTGTCGACCAAGTCTATGGTTCTGGGTTACTGGGATATTCGCGGGCTGGCGCATGCCATCCG
CATGCTCCTGGAGTTCACTGATACATCCTATGAAGAGAAACGGTACATCTGCGGGGAAGCTCCTGACTATGATAGAAGCC
AGTGGCTGGATGTGAAATACAAACTAGACCTGGACTTTCCTAACCTGCCCTATCTCATGGACGGGAAGAACAAGCTCACC
CAGAGCAATGCCATCTTGCGCTACATCGCCCGCAAGCACAACATGTGTGGGGAGACTGAAGAAGAAAAGATTCGAGTGGA
CATCATGGAGAACCAAATAATGGATTTTCGCATGCAGCTGATAAGACTCTGCTATAGTCCTGATCACGAAAAGCTGAAGC
CTCAGTACTTGGAACAGCTACCTGGACAACTGAAACAGTTCTCCTTGTTCCTGGGGAAATACTCATGGTTTGCAGGGGAA
AAGCTCACGTTTGTGGATTTCCTTACCTACGACGTCTTAGATCAGAACCGTATCTTTGAGCCCAGGTGCCTGGATGAATT
TCCAAATCTGAAGGCTTTCATGTGCCGTTTTGAGGCTTTGGAGAAAATAGCTGCCTACATGCAGTCTGACCGCTTCCTCA
AGATGCCTATCAACAACAAGATGGCCCAGTGGGGCAACAAGAGACTATACTGA

Library Parental gene expression (RPM)
SRP014902_placenta 3 .19 RPM
SRP014902_testis 22 .07 RPM
SRP018288_heart 0 .05 RPM
SRP018288_kidney 0 .69 RPM
SRP018288_liver 0 .00 RPM
SRP018288_lung 1 .32 RPM
SRP018856_adipose 4 .79 RPM
SRP035408_brain 12 .13 RPM
SRP035408_liver 3 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005380 ortholog_one2one 2 retrogenes
retro_chof_1850, retro_chof_1989,
Callithrix jacchus ENSCJAG00000003168 ortholog_one2many 1 retrogene
retro_cjac_4,
Erinaceus europaeus ENSEEUG00000014211 ortholog_one2one 1 retrogene
retro_eeur_112,
Echinops telfairi ENSETEG00000005817 ortholog_one2many 2 retrogenes
retro_etel_1074, retro_etel_1910,
Homo sapiens ENSG00000134202 ortholog_one2one 1 retrogene
retro_hsap_2419,
Microcebus murinus ENSMICG00000005185 ortholog_one2one 1 retrogene
retro_mmur_1571,
Macaca mulatta ENSMMUG00000008029 ortholog_one2one 2 retrogenes
retro_mmul_610, retro_mmul_941,
Monodelphis domestica ENSMODG00000001899 ortholog_one2many 1 retrogene
retro_mdom_331,
Mus musculus ENSMUSG00000004032 ortholog_one2one 2 retrogenes
retro_mmus_491, retro_mmus_547,
Nomascus leucogenys ENSNLEG00000003302 ortholog_one2one 1 retrogene
retro_nleu_1895,
Pan troglodytes ENSPTRG00000001063 ortholog_one2one 2 retrogenes
retro_ptro_1393, retro_ptro_1709,
Rattus norvegicus ENSRNOG00000047034 ortholog_one2many 1 retrogene
retro_rnor_963,
Tarsius syrichta ENSTSYG00000006736 ortholog_one2one 1 retrogene
retro_tsyr_145,
Tursiops truncatus ENSTTRG00000009682 ortholog_one2one 1 retrogene
retro_ttru_1828,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_10 67.28 94.35
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2. retro_sscr_855 55.68 80.00
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Download FASTA sequences of all ENSSSCG00000006821 retrocopies