Parental gene:

Gstm5, ENSMUSG00000004032

Aliases:None
Description:glutathione S-transferase, mu 5 [Source:MGI Symbol;Acc:MGI:1309466]
Organism:Mouse (Mus musculus)
Coordinates:3:107895820..107898686(+)


>ENSMUSG00000004032
ATGTCATCCAAGTCTATGGTTCTGGGTTACTGGGATATCCGCGGGCTGGCTCATGCTATCCGCATGCTTCTGGAGTTTAC
TGATACCAGCTATGAGGAGAAACGGTACATCTGTGGGGAAGCTCCTGACTATGATAGAAGCCAATGGCTGGACGTGAAAT
TCAAGCTAGATCTGGACTTTCCTAACCTGCCCTACCTCATGGACGGGAAGAACAAGATCACCCAGAGTAACGCCATCCTG
AGATACATCGCACGCAAGCACAACATGTGTGGTGACACTGAAGAAGAAAAGATACGAGTAGACATCATGGAGAACCAGAT
CATGGACTTCCGCATGCAGCTGGTTCGCCTCTGCTACAATTCTAACCACGAAAACCTGAAGCCTCAGTACTTGGAACAGC
TACCTGCACAGCTGAAACAATTCTCATTGTTCCTGGGGAAATTCACATGGTTTGCAGGAGAAAAGCTGACCTTTGTGGAT
TTTCTCACCTATGATGTCTTGGATCAGAACCGTATATTTGAGCCCAAGTGTCTGGATGAGTTCCCAAACCTGAAGGCTTT
CATGTGCCGTTTTGAGGCTTTGGAGAAGATTGCTGCATTCCTGCAGTCTGACCGCTTCTTCAAGATGCCAATCAATAACA
AGATGGCCAAGTGGGGTAACAAGTGCTTATGCTGA

Library Parental gene expression (RPM)
SRP007412_brain 85 .39 RPM
SRP007412_cerebellum 46 .03 RPM
SRP007412_heart 24 .84 RPM
SRP007412_kidney 66 .55 RPM
SRP007412_liver 9 .67 RPM
SRP007412_testis 970 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005380 ortholog_one2one 2 retrogenes
retro_chof_1850, retro_chof_1989,
Callithrix jacchus ENSCJAG00000003168 ortholog_one2many 1 retrogene
retro_cjac_4,
Erinaceus europaeus ENSEEUG00000014211 ortholog_one2one 1 retrogene
retro_eeur_112,
Echinops telfairi ENSETEG00000005817 ortholog_one2many 2 retrogenes
retro_etel_1074, retro_etel_1910,
Homo sapiens ENSG00000134202 ortholog_one2one 1 retrogene
retro_hsap_2419,
Microcebus murinus ENSMICG00000005185 ortholog_one2one 1 retrogene
retro_mmur_1571,
Macaca mulatta ENSMMUG00000008029 ortholog_one2one 2 retrogenes
retro_mmul_610, retro_mmul_941,
Monodelphis domestica ENSMODG00000001899 ortholog_one2many 1 retrogene
retro_mdom_331,
Mus musculus ENSMUSG00000027890 within_species_paralog 1 retrogene
retro_mmus_204,
Mus musculus ENSMUSG00000038155 within_species_paralog 1 retrogene
retro_mmus_521,
Mus musculus ENSMUSG00000058135 within_species_paralog 1 retrogene
retro_mmus_2692,
Nomascus leucogenys ENSNLEG00000003302 ortholog_one2one 1 retrogene
retro_nleu_1895,
Pan troglodytes ENSPTRG00000001063 ortholog_one2one 2 retrogenes
retro_ptro_1393, retro_ptro_1709,
Rattus norvegicus ENSRNOG00000047034 ortholog_one2many 1 retrogene
retro_rnor_963,
Sus scrofa ENSSSCG00000006821 ortholog_one2one 2 retrogenes
retro_sscr_10, retro_sscr_855,
Tarsius syrichta ENSTSYG00000006736 ortholog_one2one 1 retrogene
retro_tsyr_145,
Tursiops truncatus ENSTTRG00000009682 ortholog_one2one 1 retrogene
retro_ttru_1828,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_491 56.95 65.18
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2. retro_mmus_547 61.03 86.61
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Download FASTA sequences of all ENSMUSG00000004032 retrocopies