Parental gene:

Ppid, ENSRNOG00000027408

Aliases:Ppid, Cyp-40, CypD
Description:Peptidyl-prolyl cis-trans isomerase D [Source:UniProtKB/Swiss-Prot;Acc:Q6DGG0]
Organism:Rat (Rattus norvegicus)
Coordinates:2:197690279..197702613(+)


>ENSRNOG00000027408
ATGTCCCACCCATCCCCAGCAGGCAAGCCCTCCAATTCCAAGAACCCGCGAGTCTTCTTTGACGTGGACATCGGCGGGGA
GCGAGTTGGACGAATTGTTTTAGAATTGTTTGCAGATATTGTTCCTAAAACTGCAGAAAATTTTCGTGCATTGTGTACAG
GAGAAAAGGGCACTGGACCGACAACTGGGAAACCTCTGCATTTTAAAGGATGCCCTTTCCACCGAATTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGGACAGGTGGAGAAAGTATTTATGGTGAAAAATTTGAAGATGAGAA
TTTTCATTATAAGCATGATCGGGAGGGTTTGCTGAGCATGGCAAATGCAGGCCCCAATACAAATGGTTCTCAGTTCTTTA
TCACAACAGTTCCAACTCCTCATTTGGATGGGAAACATGTGGTATTTGGTCAAGTAATAAAAGGACTAGGTGTGGCAAGG
ATGCTTGAAAATGTAGAAGTGAATGGTGAAAAACCTGCCAAACTCTGTGTTATTGCAGAATGTGGAGAATTGAAGGAAGG
GGATGAATGGGGAATATTCCCCAAAGATGGCTCTGGGGATAGTCATCCAGATTTCCCTGAGGATGCAGACATAGACTTAA
AGGATGTAGATAAAATTTTATTAATATCTGAAGACTTAAAAAACATTGGAAATACTTTTTTCAAGTCTCAAAACTGGGAG
ATGGCTATTAAAAAATATGCAAAGGTTTTAAGGTACTTGGATAGTTCAAAGGCTGTTATTGAGAAAGCAGATGTATCCAG
ACTGCAACCCATAGCCTTAAGTTGTGTGCTGAATATTGGTGCTTGTAAATTGAAGATGTCAAATTGGCAGGGGGCAATTG
ACAGTTGCTTGGAGGCTCTTGAAATGGACCCTTCAAACACTAAAGCACTATACCGAAAAGCACAAGGATGGCAAGGATTG
AAAGAATATGATCAAGCATTGGCTGATCTTAAGAAGGCGCAGGAGATAGCCCCAGGAGATAAAGCTATCCAGGCAGAATT
GCTTAAAGTCAAACAAATGATAAAGGCACAGAAAGATAAAGAGAAGGCAGTGTATGCAAAAATGTTTGCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 31 .99 RPM
SRP017611_kidney 16 .47 RPM
SRP017611_liver 12 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016680 possible_ortholog 1 retrogene
retro_btau_1672,
Choloepus hoffmanni ENSCHOG00000012069 possible_ortholog 1 retrogene
retro_chof_1533,
Callithrix jacchus ENSCJAG00000001437 possible_ortholog 2 retrogenes
retro_cjac_2321, retro_cjac_4162,
Cavia porcellus ENSCPOG00000001046 possible_ortholog 2 retrogenes
retro_cpor_275, retro_cpor_436,
Echinops telfairi ENSETEG00000012655 ortholog_many2many 2 retrogenes
retro_etel_10, retro_etel_633,
Felis catus ENSFCAG00000028926 possible_ortholog 2 retrogenes
retro_fcat_494, retro_fcat_559,
Myotis lucifugus ENSMLUG00000009317 possible_ortholog 1 retrogene
retro_mluc_1667,
Macaca mulatta ENSMMUG00000017768 possible_ortholog 2 retrogenes
retro_mmul_281, retro_mmul_348,
Mustela putorius furo ENSMPUG00000018108 possible_ortholog 1 retrogene
retro_mputfur_1415,
Mus musculus ENSMUSG00000027804 ortholog_one2many 6 retrogenes
retro_mmus_1086, retro_mmus_1888, retro_mmus_2228, retro_mmus_2555, retro_mmus_3254, retro_mmus_616,
Oryctolagus cuniculus ENSOCUG00000006602 possible_ortholog 1 retrogene
retro_ocun_1625,
Otolemur garnettii ENSOGAG00000003317 possible_ortholog 2 retrogenes
retro_ogar_2355, retro_ogar_2680,
Pongo abelii ENSPPYG00000015159 possible_ortholog 1 retrogene
retro_pabe_3594,
Ictidomys tridecemlineatus ENSSTOG00000001552 possible_ortholog 1 retrogene
retro_itri_1422,
Tursiops truncatus ENSTTRG00000016269 possible_ortholog 1 retrogene
retro_ttru_1027,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_188 98.65 100.00
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Download FASTA sequences of all ENSRNOG00000027408 retrocopies