Parental gene:

PPID, ENSOCUG00000006602

Aliases:None
Description:peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:9257]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018701:1291654..1309853(-)


>ENSOCUG00000006602
ATGTCGCACCCGTCACCCCAAGCCAAGCCGTCCAACCCCAGCAACCCCCGAGTCTTCTTTGATGTGGACATCGGGGAGGA
GCGAGTTGGTCGAATTGTCTTAGAATTGTTTGCAGATATTGTACCCAAAACTGCAGAAAATTTCCGTGCACTATGCACAG
GAGAAAAAGGCATTGGACCCACCACTGGGAAACCTCTCCACTTCAAAGGATGCCCTTTCCATCGAAGTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGGACAGGTGGAGAAAGCATTTATGGTGAAAAATTTGAAGATGAGAA
TTTCTATTATAAGCATGATCGGGAGGGTTTGCTGAGCATGGCGAATGCTGGTCGCAACACAAACGGTTCTCAGTTTTTCA
TCACAACAGTTCCAACCCCTCATCTGGATGGGAAACACGTGGTATTCGGCCAAGTAATTAAAGGGATAGGTGTGGCCAGG
ACACTGGAGAACGTGGAGGTGAAAGGTGAAAAACCTGCCAAACTGTGCGTTATTGCAGAATGTGGAGAACTGAAGGAAGG
GGATGATTGGGGAATATTCCCCAAAGATGGCTCTGGTGATAGCCACCCGGATTTCCCTGAGGATGCAGATATAGACTTGA
AGGATGTAGATAAAATTTTATTAGTTACAGAAGACTTAAAAAACATTGGAAATAATTTTTTCAAATCTCAGAACTGGGAG
ATGGCTATTAAAAAATATACAAAAGTTTTAAGATACGTGGAGAGCTCCAGAGCTGTCGCTGAGGAAGCAGACAGGCTGAG
GCTGCAGCCTGTAGCTTTAAGCTGCGTGCTGAACACTGGTGCTTGCAAACTGAAGCTGTCAGACTGGCAGGGAGCCATCG
ACAGCTGTCTGGAGGCTCTTGAAATAGACCCATTGAATACCAAGGCCCTGTACCGCAAGGCTCAAGGATGGCAAGGCTTA
AAGGAATATGATGAAGCTTTGGCTGATCTTAAGAAAGCTCAGGAGATTGCGCCAGAAGATAAAGCTATCCAGGCAGAACT
GCTGAAAGTCAAACAGAAGATAAAGGCACAGAAAGACAAAGAGAAAGCAGTATATGCAAAAATGTTTGCT

Library Parental gene expression (RPM)
SRP017611_brain 57 .34 RPM
SRP017611_kidney 49 .26 RPM
SRP017611_liver 45 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016680 ortholog_one2one 1 retrogene
retro_btau_1672,
Choloepus hoffmanni ENSCHOG00000012069 ortholog_one2one 1 retrogene
retro_chof_1533,
Callithrix jacchus ENSCJAG00000001437 ortholog_one2one 2 retrogenes
retro_cjac_2321, retro_cjac_4162,
Echinops telfairi ENSETEG00000012655 possible_ortholog 2 retrogenes
retro_etel_10, retro_etel_633,
Felis catus ENSFCAG00000028926 ortholog_one2one 2 retrogenes
retro_fcat_494, retro_fcat_559,
Myotis lucifugus ENSMLUG00000009317 ortholog_one2one 1 retrogene
retro_mluc_1667,
Macaca mulatta ENSMMUG00000017768 ortholog_one2many 2 retrogenes
retro_mmul_281, retro_mmul_348,
Mustela putorius furo ENSMPUG00000018108 ortholog_one2one 1 retrogene
retro_mputfur_1415,
Otolemur garnettii ENSOGAG00000003317 ortholog_one2one 2 retrogenes
retro_ogar_2355, retro_ogar_2680,
Pongo abelii ENSPPYG00000015159 ortholog_one2one 1 retrogene
retro_pabe_3594,
Rattus norvegicus ENSRNOG00000027408 possible_ortholog 1 retrogene
retro_rnor_188,
Ictidomys tridecemlineatus ENSSTOG00000001552 ortholog_one2one 1 retrogene
retro_itri_1422,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1625 71.07 52.16
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Download FASTA sequences of all ENSOCUG00000006602 retrocopies