Parental gene:

PPID, ENSFCAG00000028926

Aliases:None
Description:peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:9257]
Organism:Cat (Felis catus)
Coordinates:B1:70120823..70134884(+)


>ENSFCAG00000028926
ATGTCTCACCCGTCCCCCCAGACTAAGCCCTCCAACCCCAGTAACCCCCGAGTCTTCTTTGACGTGGACATCGGAGGGGA
GCGAGTTGGTCGAATTGTCTTAGAATTGTTTGCAGATATTGTACCGAAAACTGCAGAAAATTTTCGTGCGTTGTGTACAG
GAGAAAAAGGCATTGGACCCACCACTGGGAAACCTCTCCATTTCAAAGGATGTCCTTTCCATCGAATTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAAAATGGGACAGGCGGAGAAAGTATTTATGGTGAAAAATTTGAAGATGAAAA
TTTCTATTATAAGCATGACCAGGAAGGTTTATTGAGCATGGCAAACGCAGGCTGCAATACAAATGGTTCTCAGTTCTTTA
TCACAACAGTTCCGACTCCTCATTTGGATGGGAAACATGTGGTATTTGGTCAAGTAATTAAAGGAATGGGTGTGGCAAGG
ATACTGGAAAATGTAGAAGTGAAAGGTGAAAAACCTGCCAAATTGTGCGTTATTGCAGAATGCGGAGAATTGAAGGAAGG
GGATGATTGGGGCATATTCCCAAAAGATGGCTCTGGTGACAGTCATCCAGATTTCCCTGAGGATGCAGATATAGATTTAA
AAGATGTAGATAAAATTTTACTAATAACAGAAGACTTAAAAAATATTGGAAATACTTTTTTCAAATCCCAGAATTGGGAG
ATGGCCATTAAAAAATATACAAAAGTTTTAAGATACGTGGAAGGTTCAAAGGCTGTTATTGAGAAAGCAGACAGATTGAA
GCTGCAACCTATAGCTTTAAGCTGCGTGCTGAATATTGGTGCTTGTAAACTGAAGATGTCAAATTGGCAGGGAGCAATTG
ACAGTTGTTTGGAGGCTCTTGAAATAGACCCATCAAATACGAAAGCATTGTACCGTAGAGCTCAAGGATGGCAAGGATTA
AAAGAATATGATCAAGCTTTGGCTGATCTTAAGAAAGCTCAGGAGATAGCACCAGAAGATAAAGCTATCCAGGCAGAATT
GCTGAAAGTCAAACAAAAGATAAAGGCACAGAAAGATAAAGAGAAGGCAGCATATGCAAAAATGTTTGCCTAA

Library Parental gene expression (RPM)
SRP017611_brain 30 .30 RPM
SRP017611_kidney 20 .51 RPM
SRP017611_liver 15 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016680 ortholog_one2one 1 retrogene
retro_btau_1672,
Choloepus hoffmanni ENSCHOG00000012069 ortholog_one2one 1 retrogene
retro_chof_1533,
Callithrix jacchus ENSCJAG00000001437 ortholog_one2one 2 retrogenes
retro_cjac_2321, retro_cjac_4162,
Cavia porcellus ENSCPOG00000001046 possible_ortholog 2 retrogenes
retro_cpor_275, retro_cpor_436,
Echinops telfairi ENSETEG00000012655 possible_ortholog 2 retrogenes
retro_etel_10, retro_etel_633,
Myotis lucifugus ENSMLUG00000009317 ortholog_one2one 1 retrogene
retro_mluc_1667,
Macaca mulatta ENSMMUG00000017768 ortholog_one2many 2 retrogenes
retro_mmul_281, retro_mmul_348,
Mustela putorius furo ENSMPUG00000018108 ortholog_one2one 1 retrogene
retro_mputfur_1415,
Oryctolagus cuniculus ENSOCUG00000006602 ortholog_one2one 1 retrogene
retro_ocun_1625,
Otolemur garnettii ENSOGAG00000003317 ortholog_one2one 2 retrogenes
retro_ogar_2355, retro_ogar_2680,
Pongo abelii ENSPPYG00000015159 ortholog_one2one 1 retrogene
retro_pabe_3594,
Rattus norvegicus ENSRNOG00000027408 possible_ortholog 1 retrogene
retro_rnor_188,
Ictidomys tridecemlineatus ENSSTOG00000001552 ortholog_one2one 1 retrogene
retro_itri_1422,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_494 82.14 88.92
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2. retro_fcat_559 77.17 56.76
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Download FASTA sequences of all ENSFCAG00000028926 retrocopies