Parental gene: | Snurf, ENSRNOG00000015976 |
| Aliases: | Snrpn, FE 294, FE 294 psi, FE294, FE294 psi |
| Description: | Small nuclear ribonucleoprotein-associated protein N [Source:UniProtKB/Swiss-Prot;Acc:P63164] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:202123031..202145397(-) |
>ENSRNOG00000015976
ATGACTGTGGGTAAGAGTAGCAAGATGCTCCAGCATATTGACTATAGAATGAGATGTATCCTGCAAGATGGAAGAATCTT
CATTGGCACCTTTAAGGCTTTTGACAAGCATATGAATTTGATCCTCTGTGATTGTGATGAGTTCAGGAAGATCAAGCCAA
AGAATGCAAAACAGCCAGAACGTGAAGAAAAACGGGTTTTGGGTCTGGTCTTGCTACGTGGAGAGAACTTGGTTTCCATG
ACAGTGGAGGGTCCACCTCCTAAAGATACTGGCATTGCTCGTGTGCCACTTGCTGGTGCTGCAGGTGGCCCTGGTGTTGG
AAGAGCAGCTGGCAGAGGAGTACCAGCAGGTGTACCTATTCCCCAAGCTCCTGCTGGATTAGCAGGCCCTGTCCGAGGAG
TTGGAGGCCCATCCCAGCAGGTCATGACCCCACAGGGAAGAGGCACTGTTGCAGCTGCTGCTGTTGCTGCTACTGCTAGC
ATTGCAGGAGCCCCAACCCAGTACCCGCCAGGACGGGGAACTCCACCTCCACCTGTAGGCAGAGCAACCCCACCTCCAGG
CATTATGGCTCCTCCACCTGGAATGAGACCACCCATGGGCCCACCAATTGGACTTCCCCCTGCTCGAGGGACACCTATAG
GCATGCCCCCTCCAGGAATGAGACCCCCTCCTCCAGGAATTAGAGGCCCACCTCCCCCAGGAATGCGTCCACCAAGACCC
TAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 448 .27 RPM |
| SRP017611_kidney | 13 .82 RPM |
| SRP017611_liver | 1 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007034 | ortholog_one2one | 3 retrogenes | |
| Bos taurus | ENSBTAG00000008251 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000010127 | ortholog_one2many | 6 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000001846 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000020270 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000022298 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000128739 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003988 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000009458 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000023361 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000023139 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000014638 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000000948 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003532 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007392 | ortholog_one2one | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000006269 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006826 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000006961 | within_species_paralog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000028124 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000001339 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010966 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1122 | 82.01 | 99.17 | Please wait, loading  |
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| 2. | retro_rnor_1314 | 85.83 | 100.00 | Please wait, loading |
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| 3. | retro_rnor_1485 | 87.08 | 86.67 | Please wait, loading |
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| 4. | retro_rnor_2161 | 83.82 | 100.00 | Please wait, loading |
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| 5. | retro_rnor_2462 | 88.89 | 96.67 | Please wait, loading |
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| 6. | retro_rnor_2517 | 71.55 | 99.17 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000015976 retrocopies