Parental gene:

UQCRC2, ENSPTRG00000007871

Aliases:None
Description:cytochrome b-c1 complex subunit 2, mitochondrial [Source:RefSeq peptide;Acc:NP_001233459]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:22060495..22091140(+)


>ENSPTRG00000007871
ATGAAGCTACTAACCAGAGCCGGCTCCTTCTCGAGATTTTATTCCCTCAAAGTTGCCCCCAAAGTTAAAGCCACAGCTGC
GCCTGCAGGAGCACCGCCACAACCTCAGGACCTTGAGTTTACCAAGTTACCAAATGGCTTGGTGATTGCTTCTTTGGAAA
ACTATTCTCCTATATCAAGAATTGGTTTGTTCATTAAAGCAGGCAGTAGATATGAGGACTTCAACAATTTAGGAACCACC
CATTTGCTGCGTCTTACATCCAGTCTGACGACAAAAGGAGCTTCATCTTTCAAGATAACCCGTGGAATTGAAGCAGTTGG
TGGCAAATTAAGTGTGACCGCAACAAGGGAAAACATGGCTTATACTGTGGAATGCCTGCGGGGTGATGTTGATATTCTAA
TGGAGTTCCTGCTCAATGTCACCACAGCACCAGAATTTCGTCGTTGGGAAGTAGCTGACCTTCAGCCTCAGCTAAAGATT
GACAAAGCTGTGGCCTTTCAGAATCCGCAGACTCATGTCATTGAAAATTTGCATGCAGCAGCTTACCGGAATGCCTTGGC
TAATCCCTTGTATTGTCCTGACTATAGGATTGGAAAAGTGACATCAGAGGAGTTACATTACTTCGTTCAGAACCATTTCA
CAAGTGCAAGAATGGCTTTGATTGGACTTGGTGTGAGTCATCCTGTTCTAAAGCAAGTTGCTGAACAGTTTCTCAACATG
AGGGGTGGGCTTGGTTTATCTGGTGCAAAGGCCAACTACCGTGGAGGTGAAATCCGAGAACAGAATGGAGACAGTCTTGT
CCATGCTGCTTTTGTAGCAGAAAGTGCTGTCGCGGGAAGTGCAGAGGCAAATGCATTTAGTGTTCTTCAGCATGTCCTCG
GTGCTGGGCCACATGTCAAGAGGGGCAGCAACACCACCAGCCATCTGCACCAGGCTGTTGCCAAGGCAACTCAGCAGCCA
TTTGATGTTTCTGCATTTAATGCCAGTTACTCAGATTCTGGACTCTTTGGGATTTATACTATCTCCCAGGCCACAGCTGC
TGGAGATGTTATCAAGGCTGCCTATAATCAAGTAAAAACAATAGCTCAAGGAAACCTTTCCAACACAGACGTCCAAGCTG
CCAAGAACAAGCTGAAAGCTGGATACCTAATGTCAGTGGAGTCTTCTGAGTGTTTCCTGGAAGAAGTCGGGTCCCAGGCT
CTAGTTGCTGGTTCTTACGTGCCACCATCCACAGTCCTTCAGCAGATTGATTCAGTGGCTAATGCTGATATCATAAATGC
TGCAAAGAAGTTTGTTTCTGGCCAGAAGTCGATGGCAGCAAGTGGAAATTTGGGACATACACCTTTTGTTGATGAGTTGT
AA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 111 .09 RPM
SRP007412_cerebellum 137 .37 RPM
SRP007412_heart 362 .67 RPM
SRP007412_kidney 169 .02 RPM
SRP007412_liver 85 .60 RPM
SRP007412_testis 146 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021651 ortholog_one2one 2 retrogenes
retro_btau_1008, retro_btau_1668,
Canis familiaris ENSCAFG00000017756 ortholog_one2one 1 retrogene
retro_cfam_2075,
Callithrix jacchus ENSCJAG00000009116 ortholog_one2many 1 retrogene
retro_cjac_222,
Echinops telfairi ENSETEG00000001084 ortholog_one2one 1 retrogene
retro_etel_2087,
Homo sapiens ENSG00000140740 ortholog_one2one 1 retrogene
retro_hsap_2785,
Gorilla gorilla ENSGGOG00000015379 ortholog_one2one 1 retrogene
retro_ggor_1941,
Myotis lucifugus ENSMLUG00000003345 ortholog_one2many 2 retrogenes
retro_mluc_1391, retro_mluc_770,
Macaca mulatta ENSMMUG00000018287 ortholog_one2one 2 retrogenes
retro_mmul_1442, retro_mmul_683,
Monodelphis domestica ENSMODG00000007645 ortholog_one2one 1 retrogene
retro_mdom_327,
Mustela putorius furo ENSMPUG00000016849 ortholog_one2many 1 retrogene
retro_mputfur_1042,
Nomascus leucogenys ENSNLEG00000012185 ortholog_one2one 1 retrogene
retro_nleu_685,
Oryctolagus cuniculus ENSOCUG00000003891 ortholog_one2many 2 retrogenes
retro_ocun_604, retro_ocun_739,
Otolemur garnettii ENSOGAG00000005478 ortholog_one2many 4 retrogenes
retro_ogar_1113, retro_ogar_112, retro_ogar_1934, retro_ogar_82,
Ochotona princeps ENSOPRG00000000419 ortholog_one2one 1 retrogene
retro_opri_455,
Pongo abelii ENSPPYG00000007174 ortholog_one2one 1 retrogene
retro_pabe_2232,
Sorex araneus ENSSARG00000010670 ortholog_one2one 1 retrogene
retro_sara_231,
Vicugna pacos ENSVPAG00000010914 ortholog_one2one 1 retrogene
retro_vpac_640,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1886 67.52 94.26
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Download FASTA sequences of all ENSPTRG00000007871 retrocopies