Parental gene:

ENSOGAG00000005478

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873615.1:233652..269354(+)


>ENSOGAG00000005478
ATGAAGCTGCTAACCAGAGCCGGGTCCTTCTCGAGATTTTATTCCCTCAAAGTTGCCCCCAAAGTTAAAGCCACAGCTGC
CCCTGCAGGAGCACCTCCACATCCTCAGGACCTTGAGTTCACCAAATTACCGAATGGTTTAGTGATTGCTTCTTTGGAAA
ACTATGCTCCTGTATCAAGGATTGGTTTGTTCATTAAAGCAGGCAGTAGATATGAGGACTCGGACAATTTAGGAACTTCT
CATTTGCTGCGTCTTGCATCCAGTTTAACTACAAAAGGAGCTTCATCTTTCAAGATAACTCGTGGAATTGAAGCAGCTGG
TGGTAAATTAAGTGTGACTGCAACAAGGGAGAACATAGCTTACACTGTGGAATGCCTGAGGGGTGATGTTGATATTCTAA
TGGAGTTCCTGCTCAATGTCACCACAGCACCAGAATTTCGTCGTTGGGAAGTAGCTGACCTTCAGTCACAACTAAGGGTT
GACAAAGCAGTGGCTTTTCAGAATCCACAGGCTCAAGTCATTGAAAATCTGCATGCTGCAGCTTACCGGAATGCCTTGGC
TAATTCCTTGTATTGTCCTGACTATAGGATTGGAAAAGTGACAGCAGAGGAGTTACACTACTATGTTCAGAATCATTTTA
CAAGTGCAAGAATGGCTTTGGTTGGACTTGGTGTGAGTCATCCTGTTCTTAAGCAAATTGCTGAACAGTTTCTCAACATG
AGGGGAGGGCTTGGTTTAACTGGTGCCAAGGCCAGATACCGTGGGGGTGAAATTCGAGAACAGAATGGAAACAGTCTTGT
CCACGCTGCTCTTGTAGCAGAAGGTGCTGCCTCAGGAAGTGCAGAAGCAAATGCATTCAGTCTTCTTCAGCATGTGCTTG
GTGCTGGACCACATGTCAAGAGGGGCAGCAATACCACCAGCCTTCTATACCAGGCTGTTGCCAAGGGAGTTCACCAGCCA
TTTGATGTTTCTGCTTTTAATGCCAGTTACTCAGATTCTGGACTTTTCGGGATTTACACTATTTCCCAGGCTGCATCTGC
TGGAGATGTTATCAAGGCTGCCTATAACCAGATAAAAACAATTGCTCAAGGAAGCCTTTCCAAAGCAGATGTCCAAGCTG
CCAGAAACAAGCTGAAAGCTGGATATTTAATGTCTGTGGAGTCTTCTGAGGGTTTCCTGGATGAAGTTGGATCCCAGGCG
CTAGTTGCTGGCTCTTACATCCCACCATCCAGAGTCCTTCAGGAGATTGATTCAGTGGCTGATGATGATGTCATAAATGC
TGCAAAGAAGTTTGTTTCAGGCCAGAAGTCAATGGCAGCAAGTGGAAATTTGGGACATACACCTTTTGTTGATGAGTTTT
AA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021651 ortholog_one2many 2 retrogenes
retro_btau_1008, retro_btau_1668,
Canis familiaris ENSCAFG00000017756 ortholog_one2many 1 retrogene
retro_cfam_2075,
Callithrix jacchus ENSCJAG00000009116 ortholog_many2many 1 retrogene
retro_cjac_222,
Echinops telfairi ENSETEG00000001084 ortholog_one2many 1 retrogene
retro_etel_2087,
Homo sapiens ENSG00000140740 ortholog_one2many 1 retrogene
retro_hsap_2785,
Gorilla gorilla ENSGGOG00000015379 ortholog_one2many 1 retrogene
retro_ggor_1941,
Myotis lucifugus ENSMLUG00000003345 ortholog_many2many 2 retrogenes
retro_mluc_1391, retro_mluc_770,
Macaca mulatta ENSMMUG00000018287 ortholog_one2many 2 retrogenes
retro_mmul_1442, retro_mmul_683,
Monodelphis domestica ENSMODG00000007645 ortholog_one2many 1 retrogene
retro_mdom_327,
Mustela putorius furo ENSMPUG00000016849 ortholog_many2many 1 retrogene
retro_mputfur_1042,
Nomascus leucogenys ENSNLEG00000012185 ortholog_one2many 1 retrogene
retro_nleu_685,
Oryctolagus cuniculus ENSOCUG00000003891 ortholog_many2many 2 retrogenes
retro_ocun_604, retro_ocun_739,
Ochotona princeps ENSOPRG00000000419 ortholog_one2many 1 retrogene
retro_opri_455,
Pongo abelii ENSPPYG00000007174 ortholog_one2many 1 retrogene
retro_pabe_2232,
Pan troglodytes ENSPTRG00000007871 ortholog_one2many 1 retrogene
retro_ptro_1886,
Sorex araneus ENSSARG00000010670 ortholog_one2many 1 retrogene
retro_sara_231,
Tupaia belangeri ENSTBEG00000010785 possible_ortholog 1 retrogene
retro_tbel_3988,
Vicugna pacos ENSVPAG00000010914 ortholog_one2many 1 retrogene
retro_vpac_640,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_82 94.92 100.00
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2. retro_ogar_112 93.82 100.00
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3. retro_ogar_1113 93.85 79.03
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4. retro_ogar_1934 82.12 66.00
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Download FASTA sequences of all ENSOGAG00000005478 retrocopies