Parental gene:

DNAJC17, ENSPTRG00000006929

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:15:37665274..37705241(-)


>ENSPTRG00000006929
ATGGCAGTGACCAAGGAGCTCTTACAGATGGACCTGTACGCGCTGCTAGGCATTGAGGAGAAGGCAGCGGACAAAGAGGT
AAAGAAGGCGTATAGGCAGAAGGCCCTCTCCTGCCACCCAGACAAAAATCCAGATAATCCCAGAGCAGCTGAACTCTTCC
ACCAGCTTTCTCAGGCCTTGGAGGTGCTGACCGATGCTGCAGCCAGGGCTGCATATGACAAGGTCAGGAAAGCCAAGAAG
CAAGCAGCAGAGAGGACCCAGAAACTTGATGAGAAAAGGAAGAAAGTGAAGCTTGACCTGGAGGCCCGGGAGCGGCAGGC
CCAGGCCCAGGAGAGTGAGGAGGAAGAGGAGAGCCGGAGCACCAGGACACTAGAGCAAGAGATCGAACGCCTGAGAGAAG
AGGGTTCCCGGCAGCTGGAGGAACAGCAGAGGCTGATCCGGGAGCAGATACGCCAGGAGCGTGACCAGAGGTTGAGAGGA
AAGGCAGAAAATACTGAAGGCCAAGGAACCCCCAAACTAAAGCTAAAATGGAAGTGCAAGAAGGAGGATGAGTCAAAAGG
TGGCTACTCCAAAGACGTCCTCCTACGGCTTTTGCAGAAGTATGGTGAGATTCTCAACCTGGTGCTTTCCAGTAAGAAGC
CAGGCACTGCTGTGGTGGAGTTTGCAACCGTCAAGGCGGCGGAGCTGGCTGTCCAGAATGAAGTTGGCCTGGTGGATAAC
CCTCTGAAGATTTCCTGGTTGGAGGGACAGCCCCAGGATGCCGTGGGCCGCAGCCACTCAGGAGTGTCAAAGGGCTCAGT
GCTGTCAGAGAGGGACTACGAGAGCCTCGTCATGATGCGCATGCGCCAGGCGGCCGAGCGGCAACAGCTGATCGCACGGA
TGCAGCAGGAAGACCAGGAGGGGCCGCCTACGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .79 RPM
SRP007412_cerebellum 14 .41 RPM
SRP007412_heart 2 .94 RPM
SRP007412_kidney 10 .62 RPM
SRP007412_liver 12 .64 RPM
SRP007412_testis 2 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020803 ortholog_one2many 4 retrogenes
retro_cjac_1013, retro_cjac_4017, retro_cjac_738, retro_cjac_820,
Cavia porcellus ENSCPOG00000014110 ortholog_one2one 1 retrogene
retro_cpor_693,
Homo sapiens ENSG00000104129 ortholog_one2one 2 retrogenes
retro_hsap_2363, retro_hsap_3468,
Gorilla gorilla ENSGGOG00000000051 ortholog_one2one 1 retrogene
retro_ggor_2340,
Macropus eugenii ENSMEUG00000005641 ortholog_one2one 2 retrogenes
retro_meug_1387, retro_meug_2001,
Myotis lucifugus ENSMLUG00000014835 ortholog_one2many 1 retrogene
retro_mluc_317,
Macaca mulatta ENSMMUG00000013160 ortholog_one2one 1 retrogene
retro_mmul_1574,
Mus musculus ENSMUSG00000034278 ortholog_one2one 1 retrogene
retro_mmus_3346,
Nomascus leucogenys ENSNLEG00000003257 ortholog_one2one 1 retrogene
retro_nleu_343,
Pongo abelii ENSPPYG00000006360 ortholog_one2one 1 retrogene
retro_pabe_2864,
Rattus norvegicus ENSRNOG00000012368 ortholog_one2many 2 retrogenes
retro_rnor_18, retro_rnor_2319,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1729 74.33 60.86
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2. retro_ptro_2351 59.15 53.95
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Download FASTA sequences of all ENSPTRG00000006929 retrocopies