Parental gene:

DNAJC17, ENSPPYG00000006360

Aliases:None
Description:DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:HGNC Symbol;Acc:25556]
Organism:Orangutan (Pongo abelii)
Coordinates:15:37161556..37206943(-)


>ENSPPYG00000006360
ATGGCAGTGACCAAGGAGCTCTTACAGATGGACCTGTACGCGCTGCTAGGCATTGAGGAGAAGGCAGCGGACAAAGAGGT
AAAGAAGGCGTATAGGCAGAAGGCCCTCTCCTGCCACCCAGACAAAAATCCAGATAATCCCAGAGCAGCTGAACTCTTCC
ACCAGCTTTCTCAGGCCTTGGAGGTGCTGACCGATGCTGCAGCCAGGGCTGCATATGACAAGGTTAGGAAAGCCAAGAAG
CAGGCAGCAGAGAGGACCCAGAAACTCGATGAGAAAAGGAAGAAAGTGAAGCTTGACCTGGAGGCCCGGGAGCGGCAGGC
CCAGGCCCAGGAGAGTGACGATGAAGAGGAGAGCCGGAGCACCAGGACACTAGAGCAAGAGATCGAACGCCTGAGAGAAG
AGGGTTCCCGGCAGCTGGAGGAACAGCAGAGGCTGATCCGGGAGCAGATACGCCAGGAGCGTGACCAGAGGTTGAGAGGA
AAGGCAGAAAGTACTGAAGGCCAAGGAACCCCCAAACTAAAGCTAAAATGGAAGTGCAAGAAGGAGGATGAGTCAAAAGG
TGGCTACTCCAAAGACGTCCTGCTACGGCTTTTGCAGAAGTATGGTGAGGTTCTCAACCTGGTGCTTTCCAGTAAGAAGC
CAGGCACTGCTGTGGTGGAGTTTGCAACCGTCAAGGCGGCGGAGCTGGCTGTCCAGAATGAAGCTGGCCTGGTGGATAAC
CCTCTGAAGATTTCCTGGTTGGAGGGACAGCCCCAGGATGCCATGGGCCGCAGCCACTCAGGACTGTCAAAGGGCTCAGT
GCTGTCAGAGAGAGACTACGAGAGCCTCGTCATGATGCGCATGCGCCAGGCGGCCGAGCGGCAACAGCTGATCGCACGGA
TGCAGCAGGAAGACCAGGAGGGGCCGCCCACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .91 RPM
SRP007412_cerebellum 20 .31 RPM
SRP007412_heart 2 .74 RPM
SRP007412_kidney 18 .20 RPM
SRP007412_liver 19 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020803 ortholog_one2many 4 retrogenes
retro_cjac_1013, retro_cjac_4017, retro_cjac_738, retro_cjac_820,
Cavia porcellus ENSCPOG00000014110 ortholog_one2one 1 retrogene
retro_cpor_693,
Homo sapiens ENSG00000104129 ortholog_one2one 2 retrogenes
retro_hsap_2363, retro_hsap_3468,
Gorilla gorilla ENSGGOG00000000051 ortholog_one2one 1 retrogene
retro_ggor_2340,
Macropus eugenii ENSMEUG00000005641 ortholog_one2one 2 retrogenes
retro_meug_1387, retro_meug_2001,
Myotis lucifugus ENSMLUG00000014835 ortholog_one2many 1 retrogene
retro_mluc_317,
Macaca mulatta ENSMMUG00000013160 ortholog_one2one 1 retrogene
retro_mmul_1574,
Mus musculus ENSMUSG00000034278 ortholog_one2one 1 retrogene
retro_mmus_3346,
Nomascus leucogenys ENSNLEG00000003257 ortholog_one2one 1 retrogene
retro_nleu_343,
Pan troglodytes ENSPTRG00000006929 ortholog_one2one 2 retrogenes
retro_ptro_1729, retro_ptro_2351,
Rattus norvegicus ENSRNOG00000012368 ortholog_one2many 2 retrogenes
retro_rnor_18, retro_rnor_2319,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2864 59.76 53.95
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000006360 retrocopies