Parental gene:

ENSOGAG00000010329

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873699.1:364004..371270(+)


>ENSOGAG00000010329
ATGCCGAAGAGGAAGGTCAGCTCTGCCGAAGGTGCGGGGAAGGAAGAGCCCAAGAGGAGGTCGGCGCGGTTGTCAGCTAA
ACCTGCTCCTGCGAAAGTGGAAACGAAGCCAAAAAAGGCAGCAGCAAGGGATAAATCTTCAGACAAAAAAGTGCAACCGA
AAGGGAAAAGAGGAGCAAAGGGAAAGCAGGCTGAAGTGGCCAACCAAGAAACTAAAGAAGATTTACCAGCAGAAAACGGA
GAAACTAAAACCGAGGAGAATCCAGCCGCTGATGAAGCAGGAGAGAAAGAAGCCAAGTCTGATTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014100 ortholog_one2many 11 retrogenes
retro_amel_1103, retro_amel_1157, retro_amel_1307, retro_amel_1378, retro_amel_1580, retro_amel_1839, retro_amel_349, retro_amel_352, retro_amel_408, retro_amel_439, retro_amel_670,
Bos taurus ENSBTAG00000018768 possible_ortholog 12 retrogenes
retro_btau_1178, retro_btau_1475, retro_btau_1560, retro_btau_1746, retro_btau_1801, retro_btau_388, retro_btau_504, retro_btau_572, retro_btau_607, retro_btau_617, retro_btau_897, retro_btau_928,
Canis familiaris ENSCAFG00000010045 possible_ortholog 12 retrogenes
retro_cfam_1056, retro_cfam_1233, retro_cfam_1318, retro_cfam_1392, retro_cfam_1522, retro_cfam_1667, retro_cfam_1904, retro_cfam_2202, retro_cfam_292, retro_cfam_404, retro_cfam_634, retro_cfam_649,
Cavia porcellus ENSCPOG00000002336 possible_ortholog 7 retrogenes
retro_cpor_1129, retro_cpor_1389, retro_cpor_334, retro_cpor_349, retro_cpor_4, retro_cpor_884, retro_cpor_949,
Equus caballus ENSECAG00000019029 ortholog_one2many 5 retrogenes
retro_ecab_1130, retro_ecab_285, retro_ecab_362, retro_ecab_800, retro_ecab_848,
Homo sapiens ENSG00000205581 ortholog_one2many 7 retrogenes
retro_hsap_1097, retro_hsap_1418, retro_hsap_1581, retro_hsap_1758, retro_hsap_1874, retro_hsap_3370, retro_hsap_762,
Monodelphis domestica ENSMODG00000020972 ortholog_many2many 5 retrogenes
retro_mdom_1085, retro_mdom_109, retro_mdom_284, retro_mdom_755, retro_mdom_88,
Pongo abelii ENSPPYG00000011426 ortholog_many2many 25 retrogenes
retro_pabe_1066, retro_pabe_1149, retro_pabe_1172, retro_pabe_1190, retro_pabe_123, retro_pabe_1264, retro_pabe_1302, retro_pabe_1504, retro_pabe_1604, retro_pabe_1842, retro_pabe_2152, retro_pabe_2211, retro_pabe_2284, retro_pabe_2380, retro_pabe_251, retro_pabe_2518, retro_pabe_2771, retro_pabe_3086, retro_pabe_3648, retro_pabe_3825, retro_pabe_504, retro_pabe_698, retro_pabe_699, retro_pabe_702, retro_pabe_760,
Pan troglodytes ENSPTRG00000031426 ortholog_many2many 22 retrogenes
retro_ptro_1256, retro_ptro_1299, retro_ptro_1301, retro_ptro_1454, retro_ptro_1556, retro_ptro_1740, retro_ptro_1821, retro_ptro_1830, retro_ptro_2058, retro_ptro_2290, retro_ptro_2559, retro_ptro_2716, retro_ptro_3119, retro_ptro_3278, retro_ptro_363, retro_ptro_463, retro_ptro_586, retro_ptro_61, retro_ptro_637, retro_ptro_696, retro_ptro_970, retro_ptro_980,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_175 97.80 90.10
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2. retro_ogar_266 77.65 84.16
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3. retro_ogar_278 81.63 97.03
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4. retro_ogar_333 79.80 95.05
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5. retro_ogar_370 72.92 94.06
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6. retro_ogar_393 62.65 81.19
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7. retro_ogar_657 75.47 52.48
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8. retro_ogar_699 75.96 100.00
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9. retro_ogar_723 70.41 94.06
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10. retro_ogar_958 67.29 100.00
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11. retro_ogar_1062 74.07 53.47
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12. retro_ogar_1186 100.00 85.15
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13. retro_ogar_1245 69.70 97.03
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14. retro_ogar_1304 70.87 100.00
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15. retro_ogar_1355 73.00 96.04
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16. retro_ogar_1437 70.75 100.00
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17. retro_ogar_1527 67.31 99.01
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18. retro_ogar_1529 64.62 60.40
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19. retro_ogar_1812 63.53 83.17
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20. retro_ogar_1901 52.63 56.44
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21. retro_ogar_1932 74.42 83.17
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22. retro_ogar_2057 69.31 100.00
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23. retro_ogar_2311 97.06 100.00
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24. retro_ogar_2325 70.59 81.19
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25. retro_ogar_2522 63.11 100.00
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26. retro_ogar_2523 69.49 57.43
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27. retro_ogar_2712 73.44 62.38
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28. retro_ogar_2729 90.20 100.00
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29. retro_ogar_2913 77.22 78.22
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30. retro_ogar_2964 98.44 63.37
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31. retro_ogar_3095 65.48 82.18
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32. retro_ogar_3133 94.06 100.00
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33. retro_ogar_3138 63.64 50.50
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34. retro_ogar_3155 96.08 100.00
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35. retro_ogar_3354 96.43 55.45
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Download FASTA sequences of all ENSOGAG00000010329 retrocopies