Parental gene:

Rbm17, ENSMUSG00000037197

Aliases:Rbm17, 2700027J02Rik
Description:RNA binding motif protein 17 [Source:MGI Symbol;Acc:MGI:1924188]
Organism:Mouse (Mus musculus)
Coordinates:2:11585438..11604153(-)


>ENSMUSG00000037197
ATGTCCCTATATGATGACCTGGGAGTGGAGACCAGTGACTCAAAAACTGAAGGCTGGTCCAAAAACTTCAAGCTCCTGCA
GTCCCAGCTCCAGGTGAAGAAGGCGGCGCTCACTCAGGCCAAGAGCCAAAGGACCAAGCAAAGTACAGTGCTTGCTCCGG
TCATCGACCTAAAGCGAGGCGGCTCCTCAGATGACCGGCAGATTGCAGACACACCACCTCACGTGGCAGCTGGGCTGAAG
GACCCTGTGCCCAGTGGGTTTTCTGCAGGGGAAGTTCTGATCCCCTTAGCTGATGAATATGACCCTATGTTCCCCAATGA
CTATGAGAAAGTGGTGAAGCGCCAGAGAGAAGAGCGGCAGAGGCAGCGGGAGCTGGAAAGACAGAAGGAAATAGAGGAAA
GAGAAAAGAGGCGTAAAGACAGACACGAAGCCAGTGGGTTTTCAAGACGACCAGACCCTGATTCTGATGAGGATGAAGAT
TATGAGCGAGAGCGGAGGAAAAGAAGTATGGGAGGAGCTGCCATCGCCCCACCGACGTCTCTTGTAGAGAAAGACAAAGA
GTTACCCCGCGATTTTCCTTATGAAGAGGACTCAAGACCGAGATCACAGTCTTCCAAAGCTGCTATTCCTCCCCCCGTGT
ATGAGGAGCCGGACAGACCAAGATCTCCAACAGGCCCCAGCAACTCCTTCCTTGCTAACATGGGTGGCACAGTGGCTCAT
AAGATTATGCAGAAGTATGGCTTCCGGGAAGGTCAGGGACTGGGGAAACACGAGCAAGGGCTGAGTACTGCATTGTCTGT
GGAGAAGACCAGCAAGCGTGGCGGCAAGATCATTGTGGGGGATGCGACAGAGAAGGGCGAGGCTCAGGATGCATCCAAGA
AGTCGGATTCAAATCCATTAACTGAAATTCTTAAGTGCCCTACTAAAGTGGTCTTGCTGAGGAACATGGTTGGTGCAGGA
GAGGTCGATGAAGACTTGGAAGTTGAAACCAAGGAAGAATGTGAAAAATATGGCAAAGTTGGGAAATGTGTGATATTTGA
GATTCCTGGTGCCCCTGATGATGAAGCAGTACGGATATTTTTAGAATTTGAGAGAGTCGAATCAGCAATTAAAGCTGTGG
TGGATCTGAATGGGAGGTATTTTGGTGGACGGGTGGTAAAAGCATGTTTCTACAATTTGGATAAATTCAGGGTCTTGGAT
CTAGCAGAGCAAGTTTGA

Library Parental gene expression (RPM)
SRP007412_brain 30 .96 RPM
SRP007412_cerebellum 61 .27 RPM
SRP007412_heart 31 .01 RPM
SRP007412_kidney 48 .51 RPM
SRP007412_liver 48 .58 RPM
SRP007412_testis 46 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021951 ortholog_one2one 2 retrogenes
retro_btau_1057, retro_btau_530,
Canis familiaris ENSCAFG00000005206 ortholog_one2one 1 retrogene
retro_cfam_844,
Callithrix jacchus ENSCJAG00000020573 ortholog_one2one 1 retrogene
retro_cjac_432,
Equus caballus ENSECAG00000008939 ortholog_one2one 1 retrogene
retro_ecab_547,
Erinaceus europaeus ENSEEUG00000013077 ortholog_one2one 1 retrogene
retro_eeur_390,
Homo sapiens ENSG00000134453 ortholog_one2one 1 retrogene
retro_hsap_1551,
Macropus eugenii ENSMEUG00000011347 ortholog_one2one 1 retrogene
retro_meug_438,
Macaca mulatta ENSMMUG00000015152 ortholog_one2many 2 retrogenes
retro_mmul_1209, retro_mmul_771,
Otolemur garnettii ENSOGAG00000015687 ortholog_one2one 1 retrogene
retro_ogar_1119,
Pongo abelii ENSPPYG00000002067 ortholog_one2many 1 retrogene
retro_pabe_1284,
Pan troglodytes ENSPTRG00000002265 ortholog_one2one 1 retrogene
retro_ptro_1044,
Ictidomys tridecemlineatus ENSSTOG00000013591 ortholog_one2one 1 retrogene
retro_itri_1376,
Tursiops truncatus ENSTTRG00000001344 ortholog_one2one 1 retrogene
retro_ttru_1758,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2855 92.40 100.00
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Download FASTA sequences of all ENSMUSG00000037197 retrocopies