Parental gene:

RBM17, ENSG00000134453

Aliases:RBM17, SPF45
Description:RNA binding motif protein 17 [Source:HGNC Symbol;Acc:16944]
Organism:Human (Homo sapiens)
Coordinates:10:6130949..6159420(+)


>ENSG00000134453
ATGTCCCTGTACGATGACCTAGGAGTGGAGACCAGTGACTCAAAAACAGAAGGCTGGTCCAAAAACTTCAAACTTCTGCA
GTCTCAGCTTCAGGTGAAGAAGGCAGCTCTCACTCAGGCAAAGAGCCAAAGGACGAAACAAAGTACAGTCCTCGCCCCAG
TCATTGACCTGAAGCGAGGTGGCTCCTCAGATGACCGGCAAATTGTGGACACTCCACCGCATGTAGCAGCTGGGCTGAAG
GATCCTGTTCCCAGTGGGTTTTCTGCAGGGGAAGTTCTGATTCCCTTAGCTGACGAATATGACCCTATGTTTCCTAATGA
TTATGAGAAAGTAGTGAAGCGCCAAAGAGAGGAACGACAGAGACAGCGGGAGCTGGAAAGACAAAAGGAAATAGAAGAAA
GGGAAAAAAGGCGTAAAGACAGACATGAAGCAAGTGGGTTTGCAAGGAGACCAGATCCAGATTCTGATGAAGATGAAGAT
TATGAGCGAGAGAGGAGGAAAAGAAGTATGGGCGGAGCTGCCATTGCCCCACCCACTTCTCTGGTAGAGAAAGACAAAGA
GTTACCCCGAGATTTTCCTTATGAAGAGGACTCAAGACCTCGATCACAGTCTTCCAAAGCAGCCATTCCTCCCCCAGTGT
ACGAGGAACAAGACAGACCGAGATCTCCAACCGGACCTAGCAACTCCTTCCTCGCTAACATGGGGGGCACGGTGGCGCAC
AAGATCATGCAGAAGTACGGCTTCCGGGAGGGCCAGGGTCTGGGGAAGCATGAGCAGGGCCTGAGCACTGCCTTGTCAGT
GGAGAAGACCAGCAAGCGTGGCGGCAAGATCATCGTGGGCGACGCCACAGAGAAAGATGCATCCAAGAAGTCAGATTCAA
ATCCGCTGACTGAAATACTTAAGTGTCCTACTAAAGTGGTCTTACTAAGGAACATGGTTGGTGCGGGAGAGGTGGATGAA
GACTTGGAAGTTGAAACCAAGGAAGAATGTGAAAAATATGGCAAAGTTGGAAAATGTGTGATATTTGAAATTCCTGGTGC
CCCTGATGATGAAGCAGTACGGATATTTTTAGAATTTGAGAGAGTTGAATCAGCAATTAAAGCGGTTGTTGACTTGAATG
GGAGGTATTTTGGTGGACGGGTGGTAAAAGCATGTTTCTACAATTTGGACAAATTCAGGGTCTTGGATTTGGCAGAACAA
GTTTGA

Library Parental gene expression (RPM)
bodymap2_adipose 73 .79 RPM
bodymap2_adrenal 128 .57 RPM
bodymap2_brain 77 .96 RPM
bodymap2_breast 76 .25 RPM
bodymap2_colon 90 .92 RPM
bodymap2_heart 45 .97 RPM
bodymap2_kidney 65 .89 RPM
bodymap2_liver 23 .45 RPM
bodymap2_lung 119 .53 RPM
bodymap2_lymph_node 96 .45 RPM
bodymap2_ovary 102 .80 RPM
bodymap2_prostate 76 .50 RPM
bodymap2_skeletal_muscle 62 .98 RPM
bodymap2_testis 96 .83 RPM
bodymap2_thyroid 102 .69 RPM
bodymap2_white_blood_cells 64 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021951 ortholog_one2one 2 retrogenes
retro_btau_1057, retro_btau_530,
Canis familiaris ENSCAFG00000005206 ortholog_one2one 1 retrogene
retro_cfam_844,
Callithrix jacchus ENSCJAG00000020573 ortholog_one2one 1 retrogene
retro_cjac_432,
Equus caballus ENSECAG00000008939 ortholog_one2one 1 retrogene
retro_ecab_547,
Erinaceus europaeus ENSEEUG00000013077 ortholog_one2one 1 retrogene
retro_eeur_390,
Macropus eugenii ENSMEUG00000011347 ortholog_one2one 1 retrogene
retro_meug_438,
Macaca mulatta ENSMMUG00000015152 ortholog_one2one 2 retrogenes
retro_mmul_1209, retro_mmul_771,
Mus musculus ENSMUSG00000037197 ortholog_one2one 1 retrogene
retro_mmus_2855,
Otolemur garnettii ENSOGAG00000015687 ortholog_one2one 1 retrogene
retro_ogar_1119,
Pongo abelii ENSPPYG00000002067 ortholog_one2one 1 retrogene
retro_pabe_1284,
Pan troglodytes ENSPTRG00000002265 ortholog_one2one 1 retrogene
retro_ptro_1044,
Ictidomys tridecemlineatus ENSSTOG00000013591 ortholog_one2one 1 retrogene
retro_itri_1376,
Tursiops truncatus ENSTTRG00000001344 ortholog_one2one 1 retrogene
retro_ttru_1758,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1551 77.33 97.76
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000134453 retrocopies