Parental gene:

Rps24, ENSMUSG00000025290

Aliases:None
Description:ribosomal protein S24 [Source:MGI Symbol;Acc:MGI:98147]
Organism:Mouse (Mus musculus)
Coordinates:14:24490680..24496146(+)


>ENSMUSG00000025290
ATGAATGACACAGTAACCATCCGGACCAGGAAGTTCATGACCAACCGTCTGCTTCAGAGGAAACAGATGGTCATTGATGT
CCTTCATCCTGGGAAGGCAACAGTACCAAAGACAGAAATTCGGGAAAAGCTGGCCAAAATGTACAAAACCACACCAGATG
TCATCTTTGTATTTGGATTCAGAACCCACTTCGGTGGTGGCAAGACCACTGGCTTTGGCATGATCTATGATTCTTTAGAT
TATGCAAAGAAGAATGAGCCTAAACACAGACTGGCAAGACATGGCCTTTATGAGAAGAAAAAGACCTCCCGAAAACAGCG
AAAGGAACGCAAGAACAGAATGAAGAAGGTCAGGGGCACGGCGAAGGCCAATGTTGGTGCTGGCAAAAAGCCAAAGGAGT
AG

Library Parental gene expression (RPM)
SRP007412_brain 95 .09 RPM
SRP007412_cerebellum 56 .45 RPM
SRP007412_heart 84 .33 RPM
SRP007412_kidney 81 .08 RPM
SRP007412_liver 94 .84 RPM
SRP007412_testis 102 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017818 possible_ortholog 17 retrogenes
retro_amel_1043, retro_amel_1258, retro_amel_1303, retro_amel_1397, retro_amel_145, retro_amel_1814, retro_amel_1832, retro_amel_225, retro_amel_24, retro_amel_251, retro_amel_328, retro_amel_331, retro_amel_515, retro_amel_718, retro_amel_768, retro_amel_81, retro_amel_886,
Cavia porcellus ENSCPOG00000020096 possible_ortholog 3 retrogenes
retro_cpor_1333, retro_cpor_14, retro_cpor_923,
Dipodomys ordii ENSDORG00000000189 ortholog_one2one 4 retrogenes
retro_dord_248, retro_dord_498, retro_dord_717, retro_dord_766,
Felis catus ENSFCAG00000000849 possible_ortholog 3 retrogenes
retro_fcat_19, retro_fcat_772, retro_fcat_85,
Gadus morhua ENSGMOG00000012595 ortholog_one2many 1 retrogene
retro_gmor_15,
Loxodonta africana ENSLAFG00000027878 possible_ortholog 10 retrogenes
retro_lafr_1017, retro_lafr_190, retro_lafr_303, retro_lafr_340, retro_lafr_439, retro_lafr_558, retro_lafr_596, retro_lafr_669, retro_lafr_854, retro_lafr_995,
Myotis lucifugus ENSMLUG00000024102 possible_ortholog 1 retrogene
retro_mluc_260,
Mustela putorius furo ENSMPUG00000003778 possible_ortholog 1 retrogene
retro_mputfur_10,
Oryctolagus cuniculus ENSOCUG00000012472 possible_ortholog 1 retrogene
retro_ocun_16,
Otolemur garnettii ENSOGAG00000011005 possible_ortholog 3 retrogenes
retro_ogar_1000, retro_ogar_2, retro_ogar_2130,
Pongo abelii ENSPPYG00000002304 possible_ortholog 1 retrogene
retro_pabe_184,
Rattus norvegicus ENSRNOG00000010189 possible_ortholog 1 retrogene
retro_rnor_206,
Sus scrofa ENSSSCG00000010328 possible_ortholog 8 retrogenes
retro_sscr_1212, retro_sscr_14, retro_sscr_242, retro_sscr_289, retro_sscr_491, retro_sscr_564, retro_sscr_718, retro_sscr_902,
Ictidomys tridecemlineatus ENSSTOG00000013000 possible_ortholog 4 retrogenes
retro_itri_167, retro_itri_376, retro_itri_528, retro_itri_728,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_321 95.42 100.00
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2. retro_mmus_602 79.85 100.00
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3. retro_mmus_1101 90.09 83.46
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4. retro_mmus_1462 94.74 100.00
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5. retro_mmus_1589 97.74 100.00
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6. retro_mmus_1592 82.58 99.25
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7. retro_mmus_1599 88.72 100.00
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8. retro_mmus_2134 87.97 100.00
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9. retro_mmus_2332 94.03 100.00
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10. retro_mmus_2497 72.73 100.00
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11. retro_mmus_2984 91.11 100.00
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12. retro_mmus_3162 56.10 90.23
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13. retro_mmus_3233 79.26 97.74
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Download FASTA sequences of all ENSMUSG00000025290 retrocopies