Parental gene:

RPS24, ENSAMEG00000017818

Aliases:None
Description:ribosomal protein S24 [Source:HGNC Symbol;Acc:10411]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192594.1:1366115..1367557(+)


>ENSAMEG00000017818
AATGACACCGTAACTATCCGGACCAGGAAGTTCATGACCAACCGACTACTTCAGCGGAAACAGATGGTCATTGATGTCCT
TCACCCCGGAAAGGCAACAGTACCTAAGACAGAAATTCGGGAAAAACTAGCCAAAATGTACAAGACCACACCAGATGTCA
TATTTGTATTTGGATTCAGAACCCATTTTGGTGGTGGCAAGACAACTGGCTTTGGCATGATTTATGATTCCTTGGATTAT
GCGAAGAAAAATGAACCCAAACATAGACTCGCAAGACATGGCCTGTATGAGAAGAAAAAGACGTCAAGAAAACAGCGAAA
GGAACGCAAGAACAGAATGAAAAAAGTCAGGGGGACTGCAAAAGCCAATGTTGGTGCTGGCAAAAAGGTATCGTTCATCA
AGGAG

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000020096 ortholog_one2one 3 retrogenes
retro_cpor_1333, retro_cpor_14, retro_cpor_923,
Dipodomys ordii ENSDORG00000000189 possible_ortholog 4 retrogenes
retro_dord_248, retro_dord_498, retro_dord_717, retro_dord_766,
Felis catus ENSFCAG00000000849 ortholog_one2one 3 retrogenes
retro_fcat_19, retro_fcat_772, retro_fcat_85,
Gadus morhua ENSGMOG00000012595 ortholog_many2many 1 retrogene
retro_gmor_15,
Loxodonta africana ENSLAFG00000027878 ortholog_one2one 10 retrogenes
retro_lafr_1017, retro_lafr_190, retro_lafr_303, retro_lafr_340, retro_lafr_439, retro_lafr_558, retro_lafr_596, retro_lafr_669, retro_lafr_854, retro_lafr_995,
Myotis lucifugus ENSMLUG00000024102 possible_ortholog 1 retrogene
retro_mluc_260,
Mustela putorius furo ENSMPUG00000003778 possible_ortholog 1 retrogene
retro_mputfur_10,
Mus musculus ENSMUSG00000025290 possible_ortholog 13 retrogenes
retro_mmus_1101, retro_mmus_1462, retro_mmus_1589, retro_mmus_1592, retro_mmus_1599, retro_mmus_2134, retro_mmus_2332, retro_mmus_2497, retro_mmus_2984, retro_mmus_3162, retro_mmus_321, retro_mmus_3233, retro_mmus_602,
Oryctolagus cuniculus ENSOCUG00000012472 possible_ortholog 1 retrogene
retro_ocun_16,
Rattus norvegicus ENSRNOG00000010189 ortholog_one2one 1 retrogene
retro_rnor_206,
Tarsius syrichta ENSTSYG00000006715 possible_ortholog 1 retrogene
retro_tsyr_1919,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_24 74.42 95.56
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2. retro_amel_81 83.72 95.56
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3. retro_amel_145 72.66 94.07
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4. retro_amel_225 63.70 96.30
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5. retro_amel_251 72.09 93.33
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6. retro_amel_328 86.26 95.56
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7. retro_amel_331 64.39 95.56
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8. retro_amel_515 74.42 94.81
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9. retro_amel_718 79.53 93.33
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10. retro_amel_768 63.37 71.11
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11. retro_amel_886 84.38 93.33
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12. retro_amel_1043 84.62 86.67
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13. retro_amel_1258 83.08 95.56
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14. retro_amel_1303 79.70 95.56
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15. retro_amel_1397 77.27 95.56
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16. retro_amel_1814 73.44 94.07
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17. retro_amel_1832 79.84 95.56
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Download FASTA sequences of all ENSAMEG00000017818 retrocopies