RetrogeneDB - Parental gene ENSMEUG00000015273 details

                            
>ENSMEUG00000015273
ATGGTGAAGGTCGGAATCAACGGATTTGGCCGTATTGGGCGCCTGGTGACTAGGGCTGCATTCACCTCAGGTCACGTAGA

TGTTGTGGCCATCAATGACCCCTTCATTGACCTCAACTACATGGTTTATATGTTTGAATATGACTCGACCCATGGCAAGT

TCAAGGGCACTGTCAAGGCTGAGAATGGGAAGCTGGTGATCAATGGAAAAGCCATTACCATCTTCCAGGAGAGGGATCCC

ACCAATATCAAATGGGGAGATGCTGGAGCCGAGTATGTTGTAGAGTCCACTGGAGTCTTTACCACCATGGAAAAGGCTGG

GGCTCACTTGAAGGGTGGAGCCAAGAGGGTCATCATCTCTGCCCCTTCTGCTGATGCCCCAATGTTCGTGATGGGAGTGA

ACCATGAGAAATATGATAATTCCCTTAAGATTGTCAGTAATGCTTCCTGCACTACCAACTGCTTGGCTCCCTTGGCCAAG

GTCATTCATGACAACTTTGGCATTGTGGAACGACTCATGACTACAGTCCATGCCATTACTGCTACCCAGAAGACAGTAGA

TGGCCCCTCTGGTAAGCTGTGGCGTGATGGGCGTGGTGCTGCCCAAAACATCATCCCTGCTTCCACTGGTGCTGCTAAGG

CTGTAGGCAAGGTCATACCTGAGCTGAACAGGAAGCTCACAGGCATGGCCTTCCGTGTTCCTACTCCCAATGTATCTGTT

GTGGATCTGACCTGCCGCCTGGAGAAACCTGCCAAATATGATGATATCAAGAAAGTGGTGAAGCAGGCATCAGAGGGACC

CTTGAAGGGCATCTTGGGCTACACAGAGGACCAGGTAGTGTCCTGTGACTTTAACAGCAACACCCACTCTTCCACCTTTG

ATGCTGGCGCTGGTATTGCCCTCAATGACCACTTTGTCAAGCTCATTTCTTGGTATGACAATGAGTATGGTTACAGCAAC

CGTGTAGTGGACCTCATGGTCTACATGGCCTCCAAGGAGAGTGGA

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000006675	possible_ortholog	5 retrogenes	retro_amel_1189, retro_amel_146, retro_amel_1792, retro_amel_1826, retro_amel_549,
Ailuropoda melanoleuca	ENSAMEG00000014329	possible_ortholog	35 retrogenes	retro_amel_1050, retro_amel_1082, retro_amel_1134, retro_amel_1174, retro_amel_1229, retro_amel_1235, retro_amel_1253, retro_amel_1308, retro_amel_1538, retro_amel_1550, retro_amel_1598, retro_amel_1605, retro_amel_1614, retro_amel_1658, retro_amel_1776, retro_amel_1801, retro_amel_1802, retro_amel_187, retro_amel_1900, retro_amel_1904, retro_amel_268, retro_amel_294, retro_amel_387, retro_amel_443, retro_amel_471, retro_amel_601, retro_amel_605, retro_amel_641, retro_amel_738, retro_amel_750, retro_amel_762, retro_amel_852, retro_amel_899, retro_amel_961, retro_amel_992,
Canis familiaris	ENSCAFG00000015077	possible_ortholog	4 retrogenes	retro_cfam_122, retro_cfam_214, retro_cfam_3, retro_cfam_7,
Callithrix jacchus	ENSCJAG00000008234	ortholog_one2many	1 retrogene	retro_cjac_1548,
Cavia porcellus	ENSCPOG00000026350	possible_ortholog	1 retrogene	retro_cpor_125,
Erinaceus europaeus	ENSEEUG00000011444	ortholog_one2one	3 retrogenes	retro_eeur_427, retro_eeur_569, retro_eeur_677,
Homo sapiens	ENSG00000111640	ortholog_one2one	42 retrogenes	retro_hsap_1014, retro_hsap_1183, retro_hsap_1188, retro_hsap_1489, retro_hsap_1490, retro_hsap_1582, retro_hsap_1672, retro_hsap_188, retro_hsap_2006, retro_hsap_2094, retro_hsap_2225, retro_hsap_2414, retro_hsap_2589, retro_hsap_2711, retro_hsap_2733, retro_hsap_2852, retro_hsap_2956, retro_hsap_307, retro_hsap_3096, retro_hsap_3268, retro_hsap_3398, retro_hsap_3491, retro_hsap_3543, retro_hsap_3599, retro_hsap_3618, retro_hsap_364, retro_hsap_3665, retro_hsap_3697, retro_hsap_4093, retro_hsap_421, retro_hsap_439, retro_hsap_441, retro_hsap_442, retro_hsap_443, retro_hsap_444, retro_hsap_445, retro_hsap_4806, retro_hsap_4820, retro_hsap_489, retro_hsap_4927, retro_hsap_710, retro_hsap_954,
Gorilla gorilla	ENSGGOG00000009553	ortholog_one2many	30 retrogenes	retro_ggor_1142, retro_ggor_1143, retro_ggor_1260, retro_ggor_1450, retro_ggor_1621, retro_ggor_1659, retro_ggor_1889, retro_ggor_1902, retro_ggor_1982, retro_ggor_2126, retro_ggor_2224, retro_ggor_2443, retro_ggor_2477, retro_ggor_2500, retro_ggor_2991, retro_ggor_3004, retro_ggor_341, retro_ggor_376, retro_ggor_412, retro_ggor_424, retro_ggor_427, retro_ggor_428, retro_ggor_429, retro_ggor_430, retro_ggor_431, retro_ggor_459, retro_ggor_804, retro_ggor_921, retro_ggor_922, retro_ggor_926,
Loxodonta africana	ENSLAFG00000002780	possible_ortholog	3 retrogenes	retro_lafr_421, retro_lafr_46, retro_lafr_954,
Microcebus murinus	ENSMICG00000006546	ortholog_one2one	16 retrogenes	retro_mmur_1049, retro_mmur_1064, retro_mmur_1084, retro_mmur_1255, retro_mmur_1431, retro_mmur_1446, retro_mmur_145, retro_mmur_1463, retro_mmur_1553, retro_mmur_1567, retro_mmur_329, retro_mmur_429, retro_mmur_464, retro_mmur_670, retro_mmur_780, retro_mmur_873,
Macaca mulatta	ENSMMUG00000018679	ortholog_one2many	33 retrogenes	retro_mmul_1016, retro_mmul_1469, retro_mmul_1529, retro_mmul_1535, retro_mmul_1713, retro_mmul_1776, retro_mmul_1812, retro_mmul_1833, retro_mmul_1839, retro_mmul_1893, retro_mmul_2056, retro_mmul_2116, retro_mmul_2133, retro_mmul_2134, retro_mmul_2220, retro_mmul_2252, retro_mmul_2253, retro_mmul_2413, retro_mmul_2430, retro_mmul_2461, retro_mmul_2562, retro_mmul_2572, retro_mmul_480, retro_mmul_494, retro_mmul_513, retro_mmul_523, retro_mmul_524, retro_mmul_525, retro_mmul_526, retro_mmul_605, retro_mmul_650, retro_mmul_776, retro_mmul_784,
Monodelphis domestica	ENSMODG00000018066	ortholog_one2many	41 retrogenes	retro_mdom_1060, retro_mdom_1089, retro_mdom_1104, retro_mdom_1137, retro_mdom_1161, retro_mdom_1184, retro_mdom_1233, retro_mdom_1241, retro_mdom_1317, retro_mdom_1358, retro_mdom_1384, retro_mdom_142, retro_mdom_1494, retro_mdom_1544, retro_mdom_1610, retro_mdom_1631, retro_mdom_1661, retro_mdom_1691, retro_mdom_1698, retro_mdom_1743, retro_mdom_1810, retro_mdom_1908, retro_mdom_2022, retro_mdom_275, retro_mdom_310, retro_mdom_354, retro_mdom_382, retro_mdom_497, retro_mdom_531, retro_mdom_552, retro_mdom_584, retro_mdom_590, retro_mdom_591, retro_mdom_628, retro_mdom_678, retro_mdom_766, retro_mdom_816, retro_mdom_828, retro_mdom_832, retro_mdom_835, retro_mdom_863,
Mustela putorius furo	ENSMPUG00000016891	possible_ortholog	28 retrogenes	retro_mputfur_1027, retro_mputfur_105, retro_mputfur_1051, retro_mputfur_1091, retro_mputfur_1152, retro_mputfur_1197, retro_mputfur_1198, retro_mputfur_1229, retro_mputfur_1278, retro_mputfur_1422, retro_mputfur_1461, retro_mputfur_1483, retro_mputfur_1630, retro_mputfur_244, retro_mputfur_300, retro_mputfur_31, retro_mputfur_317, retro_mputfur_380, retro_mputfur_481, retro_mputfur_513, retro_mputfur_555, retro_mputfur_612, retro_mputfur_717, retro_mputfur_789, retro_mputfur_817, retro_mputfur_842, retro_mputfur_88, retro_mputfur_925,
Mus musculus	ENSMUSG00000057666	ortholog_one2many	109 retrogenes	retro_mmus_1029, retro_mmus_1082, retro_mmus_1136, retro_mmus_1193, retro_mmus_1249, retro_mmus_1319, retro_mmus_1328, retro_mmus_136, retro_mmus_1365, retro_mmus_1371, retro_mmus_1467, retro_mmus_1474, retro_mmus_1480, retro_mmus_1615, retro_mmus_1692, retro_mmus_1721, retro_mmus_1728, retro_mmus_1886, retro_mmus_1922, retro_mmus_1957, retro_mmus_1983, retro_mmus_1985, retro_mmus_2009, retro_mmus_2020, retro_mmus_2030, retro_mmus_2100, retro_mmus_211, retro_mmus_2119, retro_mmus_2122, retro_mmus_2148, retro_mmus_2158, retro_mmus_2175, retro_mmus_2206, retro_mmus_2216, retro_mmus_2248, retro_mmus_2298, retro_mmus_2370, retro_mmus_2371, retro_mmus_2389, retro_mmus_2463, retro_mmus_2477, retro_mmus_2481, retro_mmus_2512, retro_mmus_2556, retro_mmus_2587, retro_mmus_2623, retro_mmus_2626, retro_mmus_2647, retro_mmus_2681, retro_mmus_2755, retro_mmus_2761, retro_mmus_2764, retro_mmus_2848, retro_mmus_2872, retro_mmus_2911, retro_mmus_2912, retro_mmus_2913, retro_mmus_2914, retro_mmus_2915, retro_mmus_2920, retro_mmus_2932, retro_mmus_2943, retro_mmus_300, retro_mmus_3036, retro_mmus_3064, retro_mmus_3120, retro_mmus_3137, retro_mmus_3140, retro_mmus_3148, retro_mmus_3151, retro_mmus_3188, retro_mmus_3193, retro_mmus_3197, retro_mmus_3216, retro_mmus_3228, retro_mmus_3306, retro_mmus_3335, retro_mmus_3336, retro_mmus_3357, retro_mmus_3377, retro_mmus_3445, retro_mmus_3514, retro_mmus_3575, retro_mmus_3650, retro_mmus_3658, retro_mmus_3693, retro_mmus_3716, retro_mmus_3814, retro_mmus_416, retro_mmus_437, retro_mmus_48, retro_mmus_553, retro_mmus_608, retro_mmus_619, retro_mmus_628, retro_mmus_635, retro_mmus_698, retro_mmus_745, retro_mmus_765, retro_mmus_766, retro_mmus_787, retro_mmus_811, retro_mmus_893, retro_mmus_914, retro_mmus_921, retro_mmus_946, retro_mmus_952, retro_mmus_976, retro_mmus_996,
Nomascus leucogenys	ENSNLEG00000003825	ortholog_one2one	44 retrogenes	retro_nleu_1017, retro_nleu_1146, retro_nleu_1302, retro_nleu_1516, retro_nleu_1522, retro_nleu_155, retro_nleu_1562, retro_nleu_1583, retro_nleu_1605, retro_nleu_164, retro_nleu_1641, retro_nleu_1711, retro_nleu_1712, retro_nleu_1760, retro_nleu_1877, retro_nleu_1879, retro_nleu_1880, retro_nleu_1881, retro_nleu_1882, retro_nleu_1883, retro_nleu_1884, retro_nleu_1916, retro_nleu_1951, retro_nleu_2113, retro_nleu_2181, retro_nleu_2195, retro_nleu_223, retro_nleu_2272, retro_nleu_2427, retro_nleu_2459, retro_nleu_2673, retro_nleu_2685, retro_nleu_2744, retro_nleu_2981, retro_nleu_346, retro_nleu_374, retro_nleu_434, retro_nleu_465, retro_nleu_519, retro_nleu_596, retro_nleu_630, retro_nleu_784, retro_nleu_808, retro_nleu_999,
Pongo abelii	ENSPPYG00000004189	ortholog_one2one	38 retrogenes	retro_pabe_1238, retro_pabe_1239, retro_pabe_1303, retro_pabe_1377, retro_pabe_1458, retro_pabe_1641, retro_pabe_1767, retro_pabe_1779, retro_pabe_1975, retro_pabe_2003, retro_pabe_2262, retro_pabe_2272, retro_pabe_2360, retro_pabe_2452, retro_pabe_2706, retro_pabe_2793, retro_pabe_284, retro_pabe_285, retro_pabe_286, retro_pabe_287, retro_pabe_2883, retro_pabe_2927, retro_pabe_2969, retro_pabe_298, retro_pabe_2981, retro_pabe_3007, retro_pabe_3038, retro_pabe_3154, retro_pabe_3355, retro_pabe_341, retro_pabe_373, retro_pabe_3735, retro_pabe_3748, retro_pabe_444, retro_pabe_542, retro_pabe_614, retro_pabe_785, retro_pabe_852,
Pan troglodytes	ENSPTRG00000004577	ortholog_one2one	43 retrogenes	retro_ptro_1008, retro_ptro_1009, retro_ptro_1065, retro_ptro_1133, retro_ptro_1337, retro_ptro_1390, retro_ptro_1513, retro_ptro_1539, retro_ptro_1573, retro_ptro_173, retro_ptro_1832, retro_ptro_1847, retro_ptro_186, retro_ptro_187, retro_ptro_188, retro_ptro_189, retro_ptro_190, retro_ptro_191, retro_ptro_1932, retro_ptro_2001, retro_ptro_2092, retro_ptro_2309, retro_ptro_2365, retro_ptro_2409, retro_ptro_2447, retro_ptro_2459, retro_ptro_248, retro_ptro_2487, retro_ptro_2506, retro_ptro_2777, retro_ptro_285, retro_ptro_2939, retro_ptro_2986, retro_ptro_3196, retro_ptro_3209, retro_ptro_322, retro_ptro_3310, retro_ptro_369, retro_ptro_507, retro_ptro_661, retro_ptro_748, retro_ptro_811, retro_ptro_815,
Rattus norvegicus	ENSRNOG00000018630	ortholog_one2many	4 retrogenes	retro_rnor_107, retro_rnor_335, retro_rnor_407, retro_rnor_91,
Rattus norvegicus	ENSRNOG00000030638	ortholog_one2many	2 retrogenes	retro_rnor_1571, retro_rnor_1777,
Sarcophilus harrisii	ENSSHAG00000014953	ortholog_one2many	4 retrogenes	retro_shar_178, retro_shar_330, retro_shar_40, retro_shar_533,
Xenopus tropicalis	ENSXETG00000033975	ortholog_one2one	1 retrogene	retro_xtro_70,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_meug_50	74.80	74.03	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_meug_70	75.27	53.73	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_meug_79	87.13	99.40	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_meug_165	86.14	60.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_meug_180	88.36	56.42	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_meug_185	90.48	81.19	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_meug_239	89.19	99.40	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_meug_374	65.08	55.22	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_meug_382	82.34	99.40	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_meug_383	68.56	57.61	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_meug_393	84.54	57.01	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_meug_416	78.67	67.16	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_meug_421	67.58	96.72	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_meug_450	89.52	73.73	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_meug_453	89.02	97.61	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_meug_460	74.14	95.22	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_meug_595	83.90	79.10	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_meug_602	87.22	67.76	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_meug_630	67.01	57.31	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_meug_643	86.44	52.84	Please wait, loading	Please wait, loading	Please wait, loading
21.	retro_meug_661	73.39	68.96	Please wait, loading	Please wait, loading	Please wait, loading
22.	retro_meug_678	81.07	61.49	Please wait, loading	Please wait, loading	Please wait, loading
23.	retro_meug_680	74.45	93.73	Please wait, loading	Please wait, loading	Please wait, loading
24.	retro_meug_720	81.78	63.58	Please wait, loading	Please wait, loading	Please wait, loading
25.	retro_meug_731	85.80	97.01	Please wait, loading	Please wait, loading	Please wait, loading
26.	retro_meug_739	78.73	94.03	Please wait, loading	Please wait, loading	Please wait, loading
27.	retro_meug_758	77.48	99.40	Please wait, loading	Please wait, loading	Please wait, loading
28.	retro_meug_761	88.34	84.48	Please wait, loading	Please wait, loading	Please wait, loading
29.	retro_meug_777	85.87	54.33	Please wait, loading	Please wait, loading	Please wait, loading
30.	retro_meug_834	84.88	51.34	Please wait, loading	Please wait, loading	Please wait, loading
31.	retro_meug_844	87.50	52.54	Please wait, loading	Please wait, loading	Please wait, loading
32.	retro_meug_866	81.46	52.54	Please wait, loading	Please wait, loading	Please wait, loading
33.	retro_meug_879	65.09	62.39	Please wait, loading	Please wait, loading	Please wait, loading
34.	retro_meug_890	90.31	86.27	Please wait, loading	Please wait, loading	Please wait, loading
35.	retro_meug_1057	92.71	57.01	Please wait, loading	Please wait, loading	Please wait, loading
36.	retro_meug_1066	78.17	58.51	Please wait, loading	Please wait, loading	Please wait, loading
37.	retro_meug_1080	86.79	62.99	Please wait, loading	Please wait, loading	Please wait, loading
38.	retro_meug_1086	78.49	78.81	Please wait, loading	Please wait, loading	Please wait, loading
39.	retro_meug_1197	77.59	51.64	Please wait, loading	Please wait, loading	Please wait, loading
40.	retro_meug_1206	89.82	85.07	Please wait, loading	Please wait, loading	Please wait, loading
41.	retro_meug_1249	93.27	62.09	Please wait, loading	Please wait, loading	Please wait, loading
42.	retro_meug_1286	78.81	99.40	Please wait, loading	Please wait, loading	Please wait, loading
43.	retro_meug_1310	85.26	56.72	Please wait, loading	Please wait, loading	Please wait, loading
44.	retro_meug_1319	78.93	72.24	Please wait, loading	Please wait, loading	Please wait, loading
45.	retro_meug_1352	77.27	52.24	Please wait, loading	Please wait, loading	Please wait, loading
46.	retro_meug_1369	76.97	52.54	Please wait, loading	Please wait, loading	Please wait, loading
47.	retro_meug_1377	85.50	79.70	Please wait, loading	Please wait, loading	Please wait, loading
48.	retro_meug_1390	64.40	55.52	Please wait, loading	Please wait, loading	Please wait, loading
49.	retro_meug_1423	82.88	87.16	Please wait, loading	Please wait, loading	Please wait, loading
50.	retro_meug_1429	54.92	56.72	Please wait, loading	Please wait, loading	Please wait, loading
51.	retro_meug_1542	79.74	68.66	Please wait, loading	Please wait, loading	Please wait, loading
52.	retro_meug_1595	89.52	99.40	Please wait, loading	Please wait, loading	Please wait, loading
53.	retro_meug_1646	82.89	55.52	Please wait, loading	Please wait, loading	Please wait, loading
54.	retro_meug_1686	85.65	67.76	Please wait, loading	Please wait, loading	Please wait, loading
55.	retro_meug_1759	92.34	70.15	Please wait, loading	Please wait, loading	Please wait, loading
56.	retro_meug_1776	79.43	61.49	Please wait, loading	Please wait, loading	Please wait, loading
57.	retro_meug_1870	83.40	69.85	Please wait, loading	Please wait, loading	Please wait, loading
58.	retro_meug_1884	78.32	67.16	Please wait, loading	Please wait, loading	Please wait, loading
59.	retro_meug_1889	80.95	55.82	Please wait, loading	Please wait, loading	Please wait, loading
60.	retro_meug_2039	92.54	99.40	Please wait, loading	Please wait, loading	Please wait, loading
61.	retro_meug_2046	54.60	94.93	Please wait, loading	Please wait, loading	Please wait, loading
62.	retro_meug_2047	93.14	60.90	Please wait, loading	Please wait, loading	Please wait, loading
63.	retro_meug_2085	90.34	52.54	Please wait, loading	Please wait, loading	Please wait, loading
64.	retro_meug_2088	80.00	59.70	Please wait, loading	Please wait, loading	Please wait, loading
65.	retro_meug_2113	83.96	55.52	Please wait, loading	Please wait, loading	Please wait, loading
66.	retro_meug_2141	58.17	61.19	Please wait, loading	Please wait, loading	Please wait, loading
67.	retro_meug_2178	73.33	57.61	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSMEUG00000015273 retrocopies

Parental gene:	GAPDH, ENSMEUG00000015273
Aliases:	None
Description:	glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:4141]
Organism:	*Wallaby (Macropus eugenii)*
Coordinates:	GeneScaffold_1715:103418..112884(+)

Parental gene:

GAPDH, ENSMEUG00000015273